| GBrowse syn |
| | | |—-|—-| | Available on platform | web + | | Date published | 2010 + | | Has DOI | 10.1002/0471250953.bi0912s31 + | | Has PMCID | PMC3162311 + | | Has PMID | 20836076 + | | Has URL | https://github.com/GMOD/GBrowse + , http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri%3Bname=chrX:620000..670000 + , http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%253A8367000..8370501 + , http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele%3Bname=X:1050001..1150000 + , http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ + | | Has author | McKay SJ + , Vergara IA + , Stajich JE + | | Has description | GBrowse_syn, or the Generic Synteny Browse … GBrowse_syn, or the Generic Synteny Browser, is a [[GBrowse]]-based [[synteny]] browser designed to display multiple genomes, with a central reference species compared to two or more additional species. It can be used to view multiple sequence alignment data, synteny or co-linearity data from other sources against genome annotations provided by GBrowse. GBrowse_syn is included with the standard GBrowse package (version 1.69 and later). GBrowse package (version 1.69 and later). + | | Has development status | active + | | Has download URL | https://github.com/GMOD/GBrowse + | | Has full name | Generic Synteny Browser + | | Has logo | GBrowse_syn_logo.png + | | Has publication details | Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis … [et al.] Chapter 9: Unit 9.12 + | | Has software maturity status | beta release + | | Has support status | active + | | Has title | The Arabidopsis Information Resource + , WormBase + , Sol Genomics + , Using the Generic Synteny Browser (GBrowse_syn). + | | Has topic | GBrowse syn + | | Is open source | Yes + | | Link type | download + , source code + , demo server + , wild URL + | | Published in | Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis … [et al.] + | | Release date | 1 January 2007 + | | Tool functionality or classification | Comparative genome visualization + | | Written in language | Perl + | | Has improper value forThis property is a special property in this wiki. | Has title + , Has description + | | Categories | Template + , GMOD in the Cloud + , GMOD Components + , Tool data + , GBrowse syn + , GMOD Developers + , GBrowse + , Comparative Genomics + , WormBase + , GMOD Component + , SemanticLink + | | Modification dateThis property is a special property in this wiki. | 15 October 2013 21:39:42 + | | Has subobjectThis property is a special property in this wiki. | GBrowse syn#https://github.com/GMOD/GBrowse + , GBrowse syn#http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri;name=chrX:620000..670000 + , GBrowse syn#http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%253A8367000..8370501 + , GBrowse syn#http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele;name=X:1050001..1150000 + , GBrowse syn#http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ + |
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| | | |—-|—-| | GBrowse syn + , GBrowse syn AGS Tutorial + , GBrowse syn PAG 2009 Workshop + , GBrowse syn Tutorial new + | Has topic | | Gbrowse syn + , Gbrowsesyn + | redirect page |
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