Difference between revisions of "Template:GMODComponents"

From GMOD
Jump to: navigation, search
(added comm. annot: table edit; changed to multi-col list)
(add Chado schema)
Line 3: Line 3:
 
{|width=80% valign="top" align="center"
 
{|width=80% valign="top" align="center"
 
|
 
|
'''Comparative Genomics Visualization'''
+
'''Community Annotation'''
 +
*Wiki [[Table Editor]]
 +
*[[Community]] addressbook
 +
 
 +
'''Comparative Genome Visualization'''
 
*[[CMap]]
 
*[[CMap]]
 
*[[SynView]]
 
*[[SynView]]
 
*[[SynBrowse]]
 
*[[SynBrowse]]
 
*[[Sybil]]
 
*[[Sybil]]
 +
 +
'''Database schema'''
 +
*[[Chado]]
  
 
'''Database tools'''
 
'''Database tools'''
Line 17: Line 24:
 
*[[LuceGene]]
 
*[[LuceGene]]
 
*[[XORT]]
 
*[[XORT]]
 
+
|
 
'''Gene Expression Visualization'''
 
'''Gene Expression Visualization'''
 
*[[Caryoscope]]
 
*[[Caryoscope]]
 
*[[GeneXplorer]]
 
*[[GeneXplorer]]
 
*[[Java TreeView]]
 
*[[Java TreeView]]
|
 
  
 
'''Genome Visualization & Editing'''
 
'''Genome Visualization & Editing'''
Line 36: Line 42:
 
* [[PubFetch]]
 
* [[PubFetch]]
 
* [[Textpresso]]
 
* [[Textpresso]]
 
+
|
 
'''Molecular Pathway Visualization'''
 
'''Molecular Pathway Visualization'''
 
* [[Pathway_Tools|Pathway Tools]]
 
* [[Pathway_Tools|Pathway Tools]]
Line 42: Line 48:
 
'''Ontology Visualization'''
 
'''Ontology Visualization'''
 
* [[GO_Graphic_Viewer|Go Graphic Viewer]]
 
* [[GO_Graphic_Viewer|Go Graphic Viewer]]
 
'''Sequence Alignment'''
 
*[[BLAST_Graphic_Viewer|Blast Graphic]]
 
|
 
'''Community Annotation'''
 
*Wiki [[Table Editor]]
 
*[[Community]] addressbook
 
  
 
'''Workflow Management'''
 
'''Workflow Management'''
Line 60: Line 59:
 
'''Tool Integration'''
 
'''Tool Integration'''
 
*[[Galaxy]]
 
*[[Galaxy]]
 +
 +
'''Sequence Alignment'''
 +
*[[BLAST_Graphic_Viewer|Blast Graphic]]
  
 
'''Utilities'''
 
'''Utilities'''

Revision as of 23:46, 28 September 2007

Community Annotation

Comparative Genome Visualization

Database schema

Database tools

Gene Expression Visualization

Genome Visualization & Editing

Literature Tools

Molecular Pathway Visualization

Ontology Visualization

Workflow Management

Middleware

Tool Integration

Sequence Alignment

Utilities