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GO Graphic Viewer

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Status
  • Mature release
  • Development: inactive
  • Support: active


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Resources


About GO Graphic Viewer

The GO Graphic Viewer module (Bio::GMOD::GO::View) generates a graphic that displays the parent and child relationships of a selected GO term. It also provides the visualization for the result from the GO::TermFinder Perl module created by the Stanford Microarray Database (SMD). This module is useful when analyzing experimental or computational results that produce a set of gene products that may have a common function or process. This distribution also includes two examples of its use in web browser-based user interfaces (goView.pl and goTermFinder.pl).



Downloads

Using GO Graphic Viewer

System Requirements


Documentation

Documentation is provided in the README file in the GO Graphic Viewer download package.



Contacts and Mailing Lists

GO Graphic Viewer Development

Development team

Gavin Sherlock, Stanford University


More on GO Graphic Viewer

Facts about "GO Graphic Viewer"RDF feed
Available on platformweb +, linux +, os x + and unix +
Has URLhttp://sourceforge.net/projects/gmod/files/GOView/ + and http://www.yeastgenome.org/cgi-bin/GO/goTermFinder.pl +
Has descriptionThe GO Graphic Viewer module (Bio::GMOD::GThe GO Graphic Viewer module (Bio::GMOD::GO::View) generates a graphic that displays the parent and child relationships of a selected GO term. It also provides the visualization for the result from the GO::TermFinder Perl module created by the Stanford Microarray Database (SMD). This module is useful when analyzing experimental or computational results that produce a set of gene products that may have a common function or process. This distribution also includes two examples of its use in web browser-based user interfaces (goView.pl and goTermFinder.pl).nterfaces (goView.pl and goTermFinder.pl). +
Has development statusinactive +
Has input formatgene or ORF names + and OBO ontology +
Has software maturity statusmature +
Has support statusactive +
Has topicGO Graphic Viewer +
Is open sourceYes +
Link typesource code + and public server +
Release date2003 +
Tool functionality or classificationOntology Visualization +
Written in languagePerl +
Has subobjectThis property is a special property in this wiki.GO Graphic Viewer#http://sourceforge.net/projects/gmod/files/GOView/ + and GO Graphic Viewer#http://www.yeastgenome.org/cgi-bin/GO/goTermFinder.pl +