GMOD

Public Chado Databases

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Public Chado Genome Database Releases

Chado PostgreSQL Dumps

These projects provide Chado database dumps that you can copy and learn from.

Please add to this list, if you have a Chado database to share, or know of someone who does. If you have a public Chado database, please consider adding an export dump file.

 pg_dump -f mychado.dump mychado

Direct Chado Access

<a href=”http://flybase.org” class=”external text”

rel=”nofollow”>FlyBase</a></span>

<a href=”http://www.genedb.org” class=”external text”

rel=”nofollow”>GeneDB</a></span>

The following connection information is for the preliminary GeneDB Chado database. This database currently contains Plasmodium genomes; more organisms will be added during 2008. This is currently a pre-release database, which may change or disappear without warning.

hostname: db.genedb.org
port: 5432
username: genedb_ro
password: no password
database name: snapshot

e.g.

psql -h db.genedb.org -U genedb_ro snapshot

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