GMOD

Chado Cell Line Module

Contents

Introduction

Tables

Table: cell_line

<protect>

   
Table: cell_line
Module: **Cell Line**
cell_line columns
FK Name Type Description
cell_line_id serial PRIMARY KEY
name character varying(255)
uniquename character varying(255) UNIQUE#1

NOT NULL
organism organism_id integer UNIQUE#1

NOT NULL
timeaccessioned timestamp without time zone NOT NULL

DEFAULT now()
timelastmodified timestamp without time zone NOT NULL

DEFAULT now()

cell_line columns

Tables referencing cell_line via foreign key constraints:

</protect>

cell_line Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_relationship

<protect>

   
Table: cell_line_relationship
Module: **Cell Line**
cell_line_relationship columns
FK Name Type Description
cell_line_relationship_id serial PRIMARY KEY
cell_line subject_id integer UNIQUE#1

NOT NULL
cell_line object_id integer UNIQUE#1

NOT NULL
cvterm type_id integer UNIQUE#1

NOT NULL

cell_line_relationship columns

Tables referencing cell_line_relationship via foreign key constraints:

cell_line_relationship Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_synonym

<protect>

   
Table: cell_line_synonym
Module: **Cell Line**
cell_line_synonym columns
FK Name Type Description
cell_line_synonym_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
synonym synonym_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL
is_current boolean NOT NULL

DEFAULT false
is_internal boolean NOT NULL

DEFAULT false

cell_line_synonym columns

Tables referencing cell_line_synonym via foreign key constraints:

cell_line_synonym Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_cvterm

<protect>

   
Table: cell_line_cvterm
Module: **Cell Line**
cell_line_cvterm columns
FK Name Type Description
cell_line_cvterm_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
cvterm cvterm_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL
rank integer UNIQUE#1

NOT NULL

cell_line_cvterm columns

Tables referencing cell_line_cvterm via foreign key constraints:

</protect>

cell_line_cvterm Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_dbxref

<protect>

   
Table: cell_line_dbxref
Module: **Cell Line**
cell_line_dbxref columns
FK Name Type Description
cell_line_dbxref_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
dbxref dbxref_id integer UNIQUE#1

NOT NULL
is_current boolean NOT NULL

DEFAULT true

cell_line_dbxref columns

Tables referencing cell_line_dbxref via foreign key constraints:

cell_line_dbxref Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_lineprop

<protect>

   
Table: cell_lineprop
Module: **Cell Line**
cell_lineprop columns
FK Name Type Description
cell_lineprop_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
cvterm type_id integer UNIQUE#1

NOT NULL
value text
rank integer UNIQUE#1

NOT NULL

cell_lineprop columns

Tables referencing cell_lineprop via foreign key constraints:

</protect>

cell_lineprop Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_lineprop_pub

<protect>

   
Table: cell_lineprop_pub
Module: **Cell Line**
cell_lineprop_pub columns
FK Name Type Description
cell_lineprop_pub_id serial PRIMARY KEY
cell_lineprop cell_lineprop_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL

cell_lineprop_pub columns

Tables referencing cell_lineprop_pub via foreign key constraints:

cell_lineprop_pub Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_feature

<protect>

   
Table: cell_line_feature
Module: **Cell Line**
cell_line_feature columns
FK Name Type Description
cell_line_feature_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
feature feature_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL

cell_line_feature columns

Tables referencing cell_line_feature via foreign key constraints:

cell_line_feature Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_cvtermprop

<protect>

   
Table: cell_line_cvtermprop
Module: **Cell Line**
cell_line_cvtermprop columns
FK Name Type Description
cell_line_cvtermprop_id serial PRIMARY KEY
cell_line_cvterm cell_line_cvterm_id integer UNIQUE#1

NOT NULL
cvterm type_id integer UNIQUE#1

NOT NULL
value text
rank integer UNIQUE#1

NOT NULL

cell_line_cvtermprop columns

Tables referencing cell_line_cvtermprop via foreign key constraints:

cell_line_cvtermprop Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_pub

<protect>

   
Table: cell_line_pub
Module: **Cell Line**
cell_line_pub columns
FK Name Type Description
cell_line_pub_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL

cell_line_pub columns

Tables referencing cell_line_pub via foreign key constraints:

cell_line_pub Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Table: cell_line_library

<protect>

   
Table: cell_line_library
Module: **Cell Line**
cell_line_library columns
FK Name Type Description
cell_line_library_id serial PRIMARY KEY
cell_line cell_line_id integer UNIQUE#1

NOT NULL
library library_id integer UNIQUE#1

NOT NULL
pub pub_id integer UNIQUE#1

NOT NULL

cell_line_library columns

Tables referencing cell_line_library via foreign key constraints:

cell_line_library Additional Comments:

Add your comments here and they will be integrated into the schema documentation as part of the next Chado release.

Categories:

Documentation

Community

Tools