Difference between revisions of "WebApollo"

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== Links ==
 
== Links ==
 
* [https://github.com/berkeleybop/jbrowse Client source on github]
 
* [https://github.com/berkeleybop/jbrowse Client source on github]
 +
* [http://code.google.com/p/apollo-web Annotation editing engine server source code on Google Code]
 +
* [http://code.google.com/p/gbol Data model and I/O layer code used by editing engine on Google Code]
 +
* [http://code.google.com/p/genomancer Trellis server code on Google Code]
 
* [http://apollo.berkeleybop.org/apollo_web/web_service_api.html Apollo Web service API]
 
* [http://apollo.berkeleybop.org/apollo_web/web_service_api.html Apollo Web service API]
  

Revision as of 07:14, 23 November 2011

Apollo}}

Introduction

The Apollo genome annotation editor, which is a Java application, allows users to view, create, and edit genomic annotations in a graphical environment. WebApollo is a new project that aims to provide similar functionality in a client-server web-based environment.

Our overall goal is to develop a lightweight Web 2.0 infrastructure that will offer easy-to-use tools for collaborative genome annotation. This includes the design and implementation of:

  1. a web browser-based version of Apollo built on top of JBrowse
  2. full support for two-way client-server exchange of genome annotations (DAS2)
  3. an annotation tracking system designed to support collaborative genome research projects

The WebApollo project is a collaboration between Suzanna Lewis's group at LBNL (the Berkeley Bioinformatics Open-source Projects group, or BBOP) and Chris Elsik's group at Georgetown.

(Funding?)

Project members

Links

Meetings

Project meetings normally take place on Mondays at 1:30pm California time. On the last Monday of the month we meet at 9am California time.

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