Difference between revisions of "Visualization"
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== Gene Expression Visualization == | == Gene Expression Visualization == | ||
| − | Components for visualizing gene expression results; currently focused on microarray based experiments. | + | Components for visualizing [[:Category:Expression|gene expression]] results; currently focused on microarray based experiments. |
* [[Caryoscope]] | * [[Caryoscope]] | ||
* [[GeneXplorer]] | * [[GeneXplorer]] | ||
* [[Java TreeView]] | * [[Java TreeView]] | ||
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| + | == Pathway Visualization == | ||
| + | |||
| + | * [[Pathway Tools]] | ||
== Ontology Visualization == | == Ontology Visualization == | ||
Revision as of 17:33, 27 May 2009
One of GMOD's strength is visualization of different types of biological data.
Contents
Genome Visualization
These components allow you to edit and view genome annotations. The two most popular components are GBrowse, a web-based genome viewer, and Apollo, a Java (desktop) application that allows you to both view and edit genome annotations.
Comparative Genomics Visualization
GMOD offers several possibilities specifically for visualizing comparative genomics.
Gene Expression Visualization
Components for visualizing gene expression results; currently focused on microarray based experiments.
Pathway Visualization
Ontology Visualization
Ontology visualization is currently supported by:
