Shiny bindings for JBrowseRApp — JBrowseRApp-shiny • JBrowseR

Output and render functions for JBrowseRApp(). The app is a separate widget with its own bundle, so it cannot render into a JBrowseROutput().

JBrowseRAppOutput(outputId, width = "100%", height = "400px")

renderJBrowseRApp(expr, env = parent.frame(), quoted = FALSE)

Arguments

outputId: output variable to read from
width, height: a valid CSS unit, or a number coerced to pixels
expr: An expression that generates a JBrowseRApp
env: The environment in which to evaluate expr.
quoted: Is expr a quoted expression (with quote())?

Value

the Shiny UI bindings for a JBrowseRApp htmlwidget

the Shiny server bindings for a JBrowseRApp htmlwidget

Details

The app reports input[[paste0(outputId, "_session")]] in the shape session = takes, _selected_feature for the clicked feature, and _location as a list with one entry per open view. A re-render that changes only session restores it in the app on the page; any other changed option builds a new app.