Function reference • JBrowseR

Rendering functions Functions for rendering JBrowserR in various contexts
`JBrowseR()`	R interface to JBrowse 2 genome browser
`JBrowseROutput()` `renderJBrowseR()` `JBrowseR_html()`	Shiny bindings for JBrowseR
Creating JBrowseR configuration Functions for creating JBrowseR configuration strings
`assembly()`	Create an assembly for a custom JBrowse view
`track_alignments()`	Create an AlignmentsTrack for a custom JBrowse 2 view
`track_data_frame()`	Create a track from an R data frame for a custom JBrowse 2 view
`track_feature()`	Create a FeatureTrack for a custom JBrowse 2 view
`track_variant()`	Create a VariantTrack for a custom JBrowse 2 view
`track_wiggle()`	Create a WiggleTrack for a custom JBrowse 2 view
`tracks()`	Create a set of tracks for a custom JBrowse 2 view
`default_session()`	Create a default session for a custom JBrowse view
Advanced customization More advanced customization options
`theme()`	Create a theme for a custom JBrowse 2 view
`json_config()`	Read in a JBrowse 2 JSON configuration file
`text_index()`	Create configuration for a JBrowse 2 text index
Utilities
`serve_data()`	Serve a local data directory for use with a browser

Reference