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• GBrowse FAQ
  ...fine a function in the init_code section which will then be called within callbacks. You can set the glyph based on any information that is available in callbacks.
  11 KB (1,733 words) - 14:48, 18 May 2013
• GBrowse Popup Balloons
  with balloons, as do callbacks. GBrowse will automatically escapes * A new section [TOOLTIPS] that has all the named text sections or callbacks you need to access through gbrowse_details
  20 KB (2,839 words) - 20:06, 8 October 2012
• GBrowse/AJAXhandlerScript
  * A new section [TOOLTIPS] that has all the named text sections or callbacks you need to access through gbrowse_details [[Image:callbacks]]
  2 KB (340 words) - 20:05, 8 October 2012
• GBrowse 1 Configuration HOWTO
  *'''allow remote callbacks''' ...callbacks ("sub ....") in the configuration sections of uploaded files.The callbacks will be executed in a Safe::World compartment, which forbids access to the
  79 KB (12,563 words) - 16:45, 15 August 2011
• GBrowse Configuration/Balloons
  ...on value substitution rules ($name, $start, etc) work with balloons, as do callbacks. GBrowse will automatically escapes single (') and double (") quotes in the
  7 KB (1,138 words) - 13:06, 29 September 2010
• Gbgff
  * The only thing to be aware of is that callbacks are disabled for security reasons ** Any server-side options configured with callbacks will fall through to the [TRACK DEFAULTS] setting, if available
  2 KB (386 words) - 15:52, 25 September 2009
• GBrowse 2.0 HOWTO
  ;allow remote callbacks ...les will be able to contain configuration stanzas with Perl callbacks. The callbacks will be executed if and only if the Perl {{CPAN|Safe::World}} module is ins
  101 KB (15,507 words) - 04:44, 9 January 2014
• January 2009 GMOD Meeting
  * Document what variables are available in [[GBrowse]] callbacks. ...sellsmithies|Russell Smithies]] also mentioned that if you put [[GBrowse]] callbacks in a separate file and then include them, the GBrowse parser becomes much l
  50 KB (7,612 words) - 18:53, 8 October 2012
• 2009 GMOD Community Survey
  ..., border, ...), based on the feature's attributes. (This is done with Perl callbacks in [[GBrowse]].) * Perl callbacks are not difficult to use when well documented. It's the major problem of bi
  26 KB (3,948 words) - 17:18, 6 October 2009
• GBrowse NGS Tutorial
  # Advanced feature: an example of callbacks to be run remotely
  38 KB (5,742 words) - 18:11, 9 October 2012
• Common Problems with GBrowse2 Installation
  ...callback(s) are causing the problem and rewrite them to be standard sub {} callbacks. If nothing else works, edit the Apache config file to set the environment
  2 KB (251 words) - 02:12, 25 May 2010
• September 2010 GMOD Meeting
  ** perl callbacks: glyphs, colours, hyperlinks, popups/tooltips * remote feature - perl callbacks cannot be used until Safe::World is fixed
  100 KB (14,725 words) - 17:31, 30 November 2012
• Extending Embedding and Customizing JBrowse
  *** add callbacks to the element
  2 KB (241 words) - 22:23, 7 March 2011
• JBrowse Configuration Guide
  ...hould not contain line breaks (see Text .conf format for info on multiline callbacks) ...t format has several benefits, including the ability to specify multi-line callbacks. Example:
  185 KB (26,536 words) - 02:48, 30 September 2020
• JBrowse FAQ
  ...le tools, can define multi-line functions (JSON doesn't allow newlines, so callbacks are specified on a single line). ...query object with query.start, query.end, query.ref e.g. chr1 along with 3 callbacks: featureCallback, finishCallback, and errorCallback. If there is an error,
  65 KB (10,432 words) - 15:23, 16 September 2020
• JBrowse Tutorial Programming for Biology 2015
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  18 KB (2,519 words) - 23:33, 19 October 2015
• JBrowse Tutorial PAG 2016
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  19 KB (2,697 words) - 06:25, 13 January 2016
• JBrowse Tutorial PAG 2015
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  19 KB (2,615 words) - 16:21, 11 January 2015
• JBrowse Tutorial Programming for Biology 2016
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  20 KB (2,903 words) - 19:59, 16 October 2016
• JBrowse Tutorial PAG 2017
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  20 KB (2,867 words) - 19:38, 15 January 2017
• JBrowse Tutorial PAG 2018
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  21 KB (2,962 words) - 05:00, 14 January 2018
• Migrating from GBrowse to JBrowse
  ====Special note about callbacks====
  2 KB (286 words) - 18:24, 9 July 2018
• JBrowse Tutorial PAG 2019
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  22 KB (3,098 words) - 21:05, 13 January 2019
• JBrowse Tutorial PAG 2020
  Much like GBrowse's perl callbacks that can change the track display, in the JBrowse configuration file you ca
  22 KB (3,210 words) - 20:11, 12 January 2020
• News/JBrowse2 v1.1.0 Released
  ===Changed callbacks language from JavaScript to Jexl=== ...iguration callbacks. Note that this is a breaking change, function()-style callbacks will no longer work.
  4 KB (538 words) - 20:28, 30 March 2021
• JBrowse 2 Tutorial PAG 2022
  ...ted language called [https://github.com/TomFrost/jexl JEXL] referred to as callbacks. We'll look at two examples here to give a flavor of the sorts of things yo
  24 KB (4,099 words) - 19:23, 29 January 2022