Available on platform
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web +
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Date published
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2010 +
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Has DOI
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10.1002/0471250953.bi0912s31 +
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Has PMCID
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PMC3162311 +
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Has PMID
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20836076 +
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Has URL
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https://github.com/GMOD/GBrowse +
, http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri%3Bname=chrX:620000..670000 +
, http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501 +
, http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele%3Bname=X:1050001..1150000 +
, http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ +
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Has author
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McKay SJ +
, Vergara IA +
, Stajich JE +
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Has description
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GBrowse_syn, or the Generic Synteny Browse … GBrowse_syn, or the Generic Synteny Browser, is a [[GBrowse]]-based [[synteny]] browser designed to display multiple genomes, with a central reference species compared to two or more additional species. It can be used to view multiple sequence alignment data, synteny or co-linearity data from other sources against genome annotations provided by GBrowse. GBrowse_syn is included with the standard GBrowse package (version 1.69 and later). GBrowse package (version 1.69 and later). +
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Has development status
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active +
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Has download URL
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https://github.com/GMOD/GBrowse +
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Has full name
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Generic Synteny Browser +
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Has logo
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GBrowse_syn_logo.png +
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Has publication details
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Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] Chapter 9: Unit 9.12 +
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Has software maturity status
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beta release +
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Has support status
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active +
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Has title
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The Arabidopsis Information Resource +
, WormBase +
, Sol Genomics +
, Using the Generic Synteny Browser (GBrowse_syn). +
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Has topic
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GBrowse syn +
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Is open source
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Yes +
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Link type
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download +
, source code +
, demo server +
, wild URL +
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Published in
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Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] +
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Release date
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1 January 2007 +
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Tool functionality or classification
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Comparative genome visualization +
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Written in language
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Perl +
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Has improper value forThis property is a special property in this wiki.
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Has title +
, Has description +
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Categories |
Template +
, GMOD in the Cloud +
, GMOD Components +
, Tool data +
, GBrowse syn +
, GMOD Developers +
, GBrowse +
, Comparative Genomics +
, WormBase +
, GMOD Component +
, SemanticLink +
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Modification dateThis property is a special property in this wiki.
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15 October 2013 21:39:42 +
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Has subobjectThis property is a special property in this wiki.
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GBrowse syn#https://github.com/GMOD/GBrowse +
, GBrowse syn#http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri;name=chrX:620000..670000 +
, GBrowse syn#http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501 +
, GBrowse syn#http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele;name=X:1050001..1150000 +
, GBrowse syn#http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ +
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