DIYA
From GMOD
Revision as of 23:34, 16 October 2013 by Girlwithglasses (Talk | contribs)
Status
- Beta release
- Development: inactive
- Support: inactive
Resources
Interoperable Components
Contents
About Do-It-Yourself Annotator (DIYA)
DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline framework, written in Perl, used for the rapid annotation of microbial genome sequences. The software is currently used to take nucleotide sequence contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence.
Status
Active development of DIYA is currently on hiatus, pending the hiring of additional people to work on it. Andrew Stewart, one of DIYA's developers also has plans to convert the DIYA modules into a series of Galaxy modules.
Visit the DIYA website.
Downloads
Using DIYA
Publications, Tutorials, and Presentations
Publications on or mentioning DIYA
DIYA: a bacterial annotation pipeline for any genomics lab. [1]
Contacts and Mailing Lists
| Mailing List Link | Description | Archive(s) | |
|---|---|---|---|
| DIYA | diyg-pub-l | DIYA general discussion and support. | Nabble (2010/05+) |
| diyg-dev-l | DIYA developer discussion. |
More on DIYA
- ↑ Cite error: Invalid
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Facts about "DIYA"RDF feed
| Available on platform | linux +, unix + and os x + |
| Has URL | https://github.com/bioteam/DIYA + |
| Has description | DIYA (Do-It-Yourself Annotator) is a modul … DIYA (Do-It-Yourself Annotator) is a modular and configurable open source pipeline framework, written in Perl, used for the rapid annotation of microbial genome sequences. The software is currently used to take nucleotide sequence contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence.
Status[edit]Active development of DIYA is currently on hiatus, pending the hiring of additional people to work on it. Andrew Stewart, one of DIYA's developers also has plans to convert the DIYA modules into a series of Galaxy modules.dules into a series of Galaxy modules. + |
| Has development status | inactive + |
| Has full name | Do-It-Yourself Annotator + |
| Has input format | FASTA +, GFF + and Genbank + |
| Has licence | Gnu GPL + |
| Has logo | DIYALogo.png + |
| Has name | DIYA + |
| Has output format | FASTA +, GFF + and Genbank + |
| Has software maturity status | beta release + |
| Has support status | inactive + |
| Has topic | DIYA + |
| Intended usage | private + |
| Interaction type | provides input for + |
| Interactor | DIYA + |
| Interacts with | GBrowse + |
| Is open source | Yes + |
| Link type | download + and website + |
| Tool functionality or classification | Genome annotation +, Workflow management + and Tool integration + |
| Written in language | Perl + |
| Has subobjectThis property is a special property in this wiki. | DIYA#https://github.com/bioteam/DIYA + and DIYA + |
