Schedule
Classes start at 9am Eastern Daylight Time (UTC-4).
The course covers the following topics in detail:
Time slot
|
Topic
|
Instructor
|
Affiliation; GMOD role
|
Day 1, AM |
GMOD in the Cloud, AWS walkthrough |
Scott Cain |
Ontario Institute for Cancer Research GMOD Project Coordinator; Chado, GBrowse
|
Day 1, AM |
GFF3 |
Scott Cain |
Ontario Institute for Cancer Research GMOD Project Coordinator; Chado, GBrowse
|
Day 1, AM/PM |
SOBA |
Barry Moore |
Sequence Ontology
|
Day 1, PM |
MAKER MAKER |
Barry Moore / Carson Holt |
Yandell Lab MAKER
|
Day 2, AM |
Chado |
Scott Cain |
Ontario Institute for Cancer Research GMOD Project Coordinator; Chado, GBrowse
|
Day 2, PM |
Tripal |
Stephen Ficklin |
Washington State University Tripal
|
Day 3, AM |
JBrowse |
Scott Cain |
Ontario Institute for Cancer Research GMOD Project Coordinator; Chado, GBrowse
|
Day 3, PM |
WebApollo |
Ed Lee |
Berkeley Bioinformatics Open-Source Projects Apollo, WebApollo
|
Day 4, AM |
GBrowse |
Scott Cain |
Ontario Institute for Cancer Research GMOD Project Coordinator; Chado, GBrowse
|
Day 4, PM |
GBrowse syn |
Sheldon McKay |
iPlant Collaborative, CSHL GBrowse_syn, GBrowse
|
Day 5, PM |
Galaxy |
Carl Eberhard |
Galaxy Project Galaxy
|
Day 5, AM |
InterMine |
Alex Kalderimis |
University of Cambridge, UK InterMine
|
GMOD thanks the generous grant from the Amazon AWS in Education program, which provided free compute time on Amazon Web Services for the course tutors and participants.