Web-apollo-meeting-2010-12-16

Minutes

• Review of action items
  • More data types in Trellis
  • Gregg has create the spreadsheet with all of these
    • UCSC genome database: track counts by type per genome assembly
    • Only high implementation priority to add are rmsk and wig
• Gregg
  • Looking at different data types in terms of difficulty and priority (as above)
  • Needs to incorporate CDS/UTR information to get it into the display (bit of an oversight)
  • Also looking at functionality of caching to not bother rechecking until a certain threshold of time expires (somewhat working now). Code is checked in. Struggling with firebug to get information needed to debug.
• Chris
  • Some problems installing JBrowse using bam directly