Difference between revisions of "Web-apollo-meeting-2010-12-16"

Revision as of 22:36, 16 December 2010

Review of action items
- More data types in Trellis
- Gregg has create the spreadsheet with all of these
  - UCSC genome database: track counts by type per genome assembly
  - Only high implementation priority to add are rmsk and wig
Gregg
- Looking at different data types in terms of difficulty and priority (as above)
- Needs to incorporate CDS/UTR information to get it into the display (bit of an oversight)
- Also looking at functionality of caching to not bother rechecking until a certain threshold of time expires (somewhat working now). Code is checked in. Struggling with firebug to get information needed to debug.
Chris
- Some problems installing JBrowse using bam directly

@@ Line 7: / Line 7: @@
 ***[https://spreadsheets.google.com/ccc?key=0Ag9y46wZI6EVdGFYa0V6WXhQaXRDMmhoQm9GRVBVMEE&hl=en&authkey=CJn73pAB UCSC genome database: track counts by type per genome assembly]
 *** Only high implementation priority to add are rmsk and wig
+* Gregg
+** Looking at different data types in terms of difficulty and priority (as above)
+** Needs to incorporate CDS/UTR information to get it into the display (bit of an oversight)
+** Also looking at functionality of caching to not bother rechecking until a certain threshold of time expires (somewhat working now). Code is checked in. Struggling with firebug to get information needed to debug.
+* Chris
+** Some problems installing JBrowse using bam directly
 [[Category:Webapollo]]
 [[Category: Webapollo-minutes]]