Difference between revisions of "PrimerDesigner.pm"
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| − | PrimerDesigner is a [[GBrowse]] plugin that uses use the [http://primer3.sourceforge.net primer3] program to design PCR primers for selected regions within the genome browser. | + | PrimerDesigner is a [[GBrowse]] plugin that uses use the <span class="pops">[http://primer3.sourceforge.net primer3]</span> program to design PCR primers for selected regions within the genome browser. |
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=How to use the PrimerDesigner plugin= | =How to use the PrimerDesigner plugin= | ||
Revision as of 12:00, 1 February 2009
PrimerDesigner is a GBrowse plugin that uses use the primer3 program to design PCR primers for selected regions within the genome browser.
Contents
How to use the PrimerDesigner plugin
Accessing the plugin
Selecting the target for the PCR primers
PCR primer design parameters
How to use the PrimerDesigner Plugin
How to install the PrimerDesigner plugin
First of all, you will need to install GBrowse, with all of its prerequisites, such as BioPerl and Graphics
Dependencies
Primer3
Bio::PrimerDesigner
Configuration
The Configuration File
Activating the Plugin
Configurable Options
Facts about "PrimerDesigner.pm"RDF feed
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