Difference between revisions of "GBrowse Ubuntu HOWTO"
From GMOD
(→Installing GBrowse with the Net Installer) |
(→Prerequisites) |
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sudo apt-get install libapache2-mod-perl2-doc | sudo apt-get install libapache2-mod-perl2-doc | ||
sudo apt-get install apache2-doc | sudo apt-get install apache2-doc | ||
+ | |||
+ | ;Make the missing cgi-bin directory | ||
+ | sudo mkdir /usr/lib/cgi-bin | ||
;Install libgd | ;Install libgd |
Revision as of 16:25, 17 April 2007
GBrowse does not have a .deb package, but several of its prerequisites are distributed in this way. This document describes how to install GBrowse on Ubuntu and other Linux distributions that use the Debian packaging system.
Prerequisites
- Install Apache and Apache-modperl
sudo apt-get install libapache2-mod-perl2 sudo apt-get install libapache2-mod-perl2-dev sudo apt-get install libapache2-mod-perl2-doc sudo apt-get install apache2-doc
- Make the missing cgi-bin directory
sudo mkdir /usr/lib/cgi-bin
- Install libgd
sudo apt-get install libgd2-dev
- Install MySQL database (optional, but recommended)
sudo apt-get install mysql-server
Installing GBrowse with the Net Installer
Get the netinstaller script from {{CVS|Generic-Genome-Browser/bin/gbrowse_netinstall.pl} and save it to disk as "gbrowse_netinstall.pl". Then run:
sudo perl gbrowse_netinstall.pl