BLAST Graphic Viewer

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2009 GMOD Community Survey

The 2009 GMOD survey focuses on genome and comparative genomics visualization. If you use any of GMOD's visualization components (such as BLAST Graphic Viewer), or if you have an interest in the topic, then you are strongly encouraged to take the survey before it closes on Friday, September 25. You may also win some GMOD gear.


The BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. This distribution includes sample databases and a BLAST Search form. It is a component of GMOD. It also know as blastGraphic.

Demo & Screenshots

Demo at Stanford

Requirements

  • The Apache web server (http://www.apache.org/)
  • Perl 5.005 or higher
  • Perl modules: File::Basename and File::Listing
  • Perl modules: GD and CGI
  • BioPerl
  • BLAST or BLAT applications

See the INSTALL file in the distribution for more details.

Downloads

From SourceForge

Contact

Shuai Weng.