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| − | The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at [http://www.ensembl.org Ensembl], and the other primarily used for genome annotation and maintained at the [http://berkeleybop.org/ Berkeley Bioinformatics and Ontologies Project]. The latter is part of the GMOD project.
| + | Apollo documentation, mailing lists, is now actively maintained at [http://genomearchitect.org Genome Architect]. |
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| − | [http://apollo.berkeleybop.org Apollo Homepage]
| + | Source code, releases, and issues can be found on [https://github.com/gmod/apollo/ GitHub]. |
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| − | ==Demo & Screenshots==
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| − | See [http://apollo.berkeleybop.org/current/images/mainwindow.jpg this screenshot].
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| − | ==Requirements==
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| − | JDK 1.5 or higher.
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| − | ==Documentation==
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| − | * [http://apollo.berkeleybop.org/current/userguide.html Apollo userguide]
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| − | * [http://apollo.berkeleybop.org/current/javadoc/ Apollo Javadocs]
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| − | * [http://sourceforge.net/tracker/?atid=462763&group_id=27707&func=browse Apollo bug tracker at Sourceforge]
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| − | === Presentations ===
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| − | * [[Media:Apollo.ppt|Progress Report]] - from [[May 2005 GMOD Meeting]]
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| − | * [[Media:Harris 040527.ppt|Future Plans]] - from [[April 2004 GMOD Meeting]]
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| − | * [[Media:Apollo.GMOD.ppt|Progress Report]] - from [[September 2003 GMOD Meeting]]
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| − | * [[Media:Apollo.GMOD.May2003.ppt|Progress Report]] - from [[May 2003 GMOD Meeting]]
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| − | ==Contact==
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| − | * Ed Lee, [mailto:elee@lbl.gov elee@lbl.gov]
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| − | * The [http://mail.fruitfly.org/mailman/listinfo/apollo Apollo mailing list]
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| − | ==Downloads==
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| − | [http://sourceforge.net/project/showfiles.php?group_id=27707 From SourceForge.]
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| − | ==Users==
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| − | Off the top of the heads of the attendees of the [[November 2007 GMOD Meeting]]. Sorted by version.
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| − | * Triggers
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| − | ** VMWare
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| − | ** Dolan-Rice
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| − | * Crabtree
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| − | ** Paramecium
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| − | ** INRA
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| − | ** UCSF (Smith)
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| − | * cXML
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| − | ** FlyBase
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| − | ** BovineBase
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| − | ** VectorBase
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| | [[Category:Annotation]] | | [[Category:Annotation]] |
| | [[Category:Apollo]] | | [[Category:Apollo]] |
| − | [[Category:GMOD Components]]
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| | [[Category:Java]] | | [[Category:Java]] |
| | + | [[Category:GMOD_Components]] |
| | + | [[Category:GMOD_Component]] |
| | + | [[Category:WebApollo]] |
Latest revision as of 22:45, 16 February 2017
Apollo documentation, mailing lists, is now actively maintained at Genome Architect.
Source code, releases, and issues can be found on GitHub.
