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File:PAG2009 poster URGI GnpIS.pdf
= GnpIS, the plant information system of INRA URGI unit: Towards a bridge between genomic and genetic data
Poster by DelphineSteinbach, Erik Kimmel, Michael Alaux, Sophie Durand, Cyril Pommier, Isabelle Luyten, NacerMohellibi, DaphnéVerdelet, Aminah-Olivia Keliet, SébastienReboux, HadiQuesneville presented at PAG 2009.
Abstract
URGI is a bioinformatics research INRA unit (previously only dedicated to Genoplanteprojects but now open to other projects). It hosts a bioinformatics platform which offers services (databases, tools, power units..) to biologists. It develops also an information system (I.S.) to store genomic and genetic data for plant, plant models or plant of agronomical interest (Wheat, Grapevine, Maize, Rape...) and its bioagressors(fungi).
Our research axis are data integration (in our GnpISinformation system) and dynamic genome study based on repeat detection (REPET software). The results presented here are the development of all the I.S., its evolution in time, its databases, data content and the current development concerning the creation of a new portal to query through all the databases of the S.I, using both Lucene(via HibernateSearch) and BioMart (EBI) technologies.
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| current | 10:38, 27 January 2009 | (545 KB) | Malaux (Talk | contribs) |
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