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GBrowse syn
Available on platform web  +
Date published 2010  +
Has DOI 10.1002/0471250953.bi0912s31  +
Has PMCID PMC3162311  +
Has PMID 20836076  +
Has URL https://github.com/GMOD/GBrowse  + , http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri%3Bname=chrX:620000..670000  + , http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501  + , http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele%3Bname=X:1050001..1150000  + , http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/  +
Has author McKay SJ  + , Vergara IA  + , Stajich JE  +
Has description GBrowse_syn, or the Generic Synteny BrowseGBrowse_syn, or the Generic Synteny Browser, is a [[GBrowse]]-based [[synteny]] browser designed to display multiple genomes, with a central reference species compared to two or more additional species. It can be used to view multiple sequence alignment data, synteny or co-linearity data from other sources against genome annotations provided by GBrowse. GBrowse_syn is included with the standard GBrowse package (version 1.69 and later). GBrowse package (version 1.69 and later).  +
Has development status active  +
Has download URL https://github.com/GMOD/GBrowse  +
Has full name Generic Synteny Browser  +
Has logo GBrowse_syn_logo.png  +
Has publication details Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] Chapter 9: Unit 9.12  +
Has software maturity status beta release  +
Has support status active  +
Has title The Arabidopsis Information Resource  + , WormBase  + , Sol Genomics  + , Using the Generic Synteny Browser (GBrowse_syn).  +
Has topic GBrowse syn +
Is open source Yes  +
Link type download  + , source code  + , demo server  + , wild URL  +
Published in Current protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.]  +
Release date 1 January 2007  +
Tool functionality or classification Comparative genome visualization  +
Written in language Perl  +
Has improper value forThis property is a special property in this wiki. Has title  + , Has description  +
Categories Template  + , GMOD in the Cloud  + , GMOD Components  + , Tool data  + , GBrowse syn  + , GMOD Developers  + , GBrowse  + , Comparative Genomics  + , WormBase  + , GMOD Component  + , SemanticLink  +
Modification dateThis property is a special property in this wiki. 15 October 2013 21:39:42  +
Has subobjectThis property is a special property in this wiki. GBrowse syn#https://github.com/GMOD/GBrowse + , GBrowse syn#http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri;name=chrX:620000..670000 + , GBrowse syn#http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501 + , GBrowse syn#http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele;name=X:1050001..1150000 + , GBrowse syn#http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ +
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GBrowse syn + , GBrowse syn AGS Tutorial + , GBrowse syn PAG 2009 Workshop + , GBrowse syn Tutorial new + Has topic
Gbrowse syn + , Gbrowsesyn + redirect page
 

 

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