Difference between revisions of "WebGBrowse"
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== Documentation == | == Documentation == | ||
| − | Information on [http://webgbrowse.cgb.indiana.edu/ WebGBrowse] is available | + | Information on [http://webgbrowse.cgb.indiana.edu/ WebGBrowse] is available in several places: |
* [http://webgbrowse.cgb.indiana.edu/tutorial.html User Tutorial] - this is an extensive user guide for WebGBrowse | * [http://webgbrowse.cgb.indiana.edu/tutorial.html User Tutorial] - this is an extensive user guide for WebGBrowse | ||
* [http://webgbrowse.cgb.indiana.edu/glyphdoc.html GBrowse Glyph Library] - shows what all those [[GBrowse]] glyphs look like. | * [http://webgbrowse.cgb.indiana.edu/glyphdoc.html GBrowse Glyph Library] - shows what all those [[GBrowse]] glyphs look like. | ||
Revision as of 22:52, 27 May 2010
This page or section is under construction.
WebGBrowse is a web interface for setting up GBrowse instances. It is an easy way to enable biologists to upload their data files and configure GBrowse instances without having to go through the effort of setting up their own server. WebGBrowse includes a graphical user interface for configuring all GBrowse glyphs. WebGBrowse is a good match for any organization that has users who want to create their own GBrowse instances; and it is also a good way to learn about GBrowse glyphs and how to configure them. WebGBrowse was developed at Indiana University's Center for Genomics and Bioinformatics. WebGBrowse can be downloaded and installed locally, or you can use the WebGBrowse at CGB.
Documentation
Information on WebGBrowse is available in several places:
- User Tutorial - this is an extensive user guide for WebGBrowse
- GBrowse Glyph Library - shows what all those GBrowse glyphs look like.
- FAQ - Frequently asked questions for WebGBrowse.
- "Podicheti R., Gollapudi R., Dong Q. (2009). WebGBrowse - a web server for GBrowse." Bioinformatics 25(12): 1550-1551. - the WebGBrowse paper.
- "WebGBrowse: GBrowse Configuration Management", presentation by Ram Podicheti at the January 2009 GMOD Meeting.
WebGBrowse and GMOD
WebGBrowse was nominated for GMOD Membership on 2010/05/26. If you have any feedback or comments on WebGBrowse becoming a part of GMOD, please respond on the GBrowse list or send mail directly to the GMOD Help Desk. Please send your thoughts by June 10.
The CGB is willing to
- support WebGBrowse for at least 2 years,
- setup a public email support list
- move the code to a public repository.
