Difference between revisions of "Web-apollo-meeting-2011-3-21"
From GMOD
(New page: * Jay ** Has a report on connecting Apollo to Trellis. Test will tell us where things stand. ** To-Do more testing range queries on Chado from Trellis (their test machine is called 'dog') ...) |
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** Needs to discuss performance issues with Gregg. | ** Needs to discuss performance issues with Gregg. | ||
** He is going to find out whether their version of PostGres (8.1) supports materialized views. Ed says that they need to move to v9. | ** He is going to find out whether their version of PostGres (8.1) supports materialized views. Ed says that they need to move to v9. | ||
+ | ** AI - Georgetown needs to set up TomCat 7 | ||
+ | * Gregg | ||
+ | ** Simplified editing | ||
+ | ** Keeping in the loop with Mitch on the two-level problem | ||
+ | ** AI - Ed to look at different approaches to implementing Authorization. | ||
+ | ** [http://genomancer.elasticbeanstalk.com/ demo] | ||
+ | * Ed | ||
+ | ** Thinking about approaches for undo. | ||
+ | ** Committed code updates, now combined UTR/CDS comes back as single exon (rather than 2 separate features). Need to add translation start/ends now. | ||
+ | ** Intron splits working, Exon splits will provide the user with 2 options: | ||
+ | **# split creating a single base gap | ||
+ | **# split and snap edges to closest donor/acceptor sites | ||
+ | * All | ||
+ | ** Planning on an annotation jamboree next September, 2011 | ||
+ | |||
+ | [[Category:Apollo]] | ||
+ | [[Category: Webapollo]] | ||
+ | [[Category: JBrowse]] |
Latest revision as of 22:18, 21 March 2011
- Jay
- Has a report on connecting Apollo to Trellis. Test will tell us where things stand.
- To-Do more testing range queries on Chado from Trellis (their test machine is called 'dog')
- Needs to discuss performance issues with Gregg.
- He is going to find out whether their version of PostGres (8.1) supports materialized views. Ed says that they need to move to v9.
- AI - Georgetown needs to set up TomCat 7
- Gregg
- Simplified editing
- Keeping in the loop with Mitch on the two-level problem
- AI - Ed to look at different approaches to implementing Authorization.
- demo
- Ed
- Thinking about approaches for undo.
- Committed code updates, now combined UTR/CDS comes back as single exon (rather than 2 separate features). Need to add translation start/ends now.
- Intron splits working, Exon splits will provide the user with 2 options:
- split creating a single base gap
- split and snap edges to closest donor/acceptor sites
- All
- Planning on an annotation jamboree next September, 2011