Difference between revisions of "Template:ChadoTable feature genotype"
From GMOD
(Table definition, first upload on 2010/11/22.) |
(Table definition for Chado on 2010/11/24) |
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| − | <noinclude>{{ChadoTableTemplateHeader}}</noinclude> | + | <protect><noinclude>{{ChadoTableTemplateHeader}}</noinclude> |
| + | {{ChadoTableDesc|Genetic|feature_genotype|}} | ||
{{ChadoColumnsHeader|Genetic|feature_genotype}} | {{ChadoColumnsHeader|Genetic|feature_genotype}} | ||
| − | {{ChadoColumnDesc||feature_genotype_id|serial|''PRIMARY KEY'' | + | {{ChadoColumnDesc||feature_genotype_id|serial|''PRIMARY KEY''<br /> |
| − | + | ||
}} | }} | ||
| − | {{ChadoColumnDesc|{{ChadoModuleTableLink|Sequence|feature}}|feature_id|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|Sequence|feature}}|feature_id|integer|''UNIQUE#1''<br /> |
| − | + | ''NOT NULL''<br /> | |
| − | ''NOT NULL'' | + | |
| − | + | ||
}} | }} | ||
| − | {{ChadoColumnDesc|{{ChadoModuleTableLink|Genetic|genotype}}|genotype_id|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|Genetic|genotype}}|genotype_id|integer|''UNIQUE#1''<br /> |
| − | + | ''NOT NULL''<br /> | |
| − | ''NOT NULL'' | + | |
| − | + | ||
}} | }} | ||
| − | {{ChadoColumnDesc|{{ChadoModuleTableLink|Sequence|feature}}|chromosome_id|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|Sequence|feature}}|chromosome_id|integer|''UNIQUE#1''<br /> |
| − | + | ||
A feature of SO type "chromosome".}} | A feature of SO type "chromosome".}} | ||
| − | {{ChadoColumnDesc||rank|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc||rank|integer|''UNIQUE#1''<br /> |
| − | + | ''NOT NULL''<br /> | |
| − | ''NOT NULL'' | + | |
| − | + | ||
rank can be used for | rank can be used for | ||
n-ploid organisms or to preserve order.}} | n-ploid organisms or to preserve order.}} | ||
| − | {{ChadoColumnDesc||cgroup|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc||cgroup|integer|''UNIQUE#1''<br /> |
| − | + | ''NOT NULL''<br /> | |
| − | ''NOT NULL'' | + | |
| − | + | ||
Spatially distinguishable | Spatially distinguishable | ||
group. group can be used for distinguishing the chromosomal groups, | group. group can be used for distinguishing the chromosomal groups, | ||
for example (RNAi products and so on can be treated as different | for example (RNAi products and so on can be treated as different | ||
groups, as they do not fall on a particular chromosome).}} | groups, as they do not fall on a particular chromosome).}} | ||
| − | {{ChadoColumnDesc|{{ChadoModuleTableLink|CV|cvterm}}|cvterm_id|integer|''UNIQUE#1'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|CV|cvterm}}|cvterm_id|integer|''UNIQUE#1''<br /> |
| − | + | ''NOT NULL''<br /> | |
| − | ''NOT NULL'' | + | |
| − | + | ||
}} | }} | ||
{{ChadoColumnsFooter}} | {{ChadoColumnsFooter}} | ||
{{ChadoTablesReferencingHeader|feature_genotype}} | {{ChadoTablesReferencingHeader|feature_genotype}} | ||
| − | + | * None.</protect> | |
| − | * None. | + | |
| − | </protect> | + | |
Latest revision as of 19:23, 24 November 2010
This template is a Chado Table Template. It defines a single table from the Chado schema, and every Chado table has a template like this one. This template is automatically included in two places:
- The module page for the module the table is a part of. This is where updates and comments should be posted.
- The Chado Tables page, which lists all tables.
You can include this template anywhere you want to show the table description.
| Table: | feature_genotype |
| Module: | Genetic |
| FK | Name | Type | Description |
|---|---|---|---|
| feature_genotype_id | serial | PRIMARY KEY | |
| feature | feature_id | integer | UNIQUE#1 NOT NULL |
| genotype | genotype_id | integer | UNIQUE#1 NOT NULL |
| feature | chromosome_id | integer | UNIQUE#1 A feature of SO type "chromosome". |
| rank | integer | UNIQUE#1 NOT NULL | |
| cgroup | integer | UNIQUE#1 NOT NULL | |
| cvterm | cvterm_id | integer | UNIQUE#1 NOT NULL
|
Tables referencing feature_genotype via foreign key constraints:
- None.
