Difference between revisions of "Template:ChadoTable db"

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(Table definition, first upload on 2010/11/22.)
 
(Table definition for Chado on 2010/11/24)
 
(One intermediate revision by the same user not shown)
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<noinclude>{{ChadoTableTemplateHeader}}</noinclude><protect>{{ChadoTableDesc|General|db|A database authority. Typical databases in
+
<protect><noinclude>{{ChadoTableTemplateHeader}}</noinclude>
 +
{{ChadoTableDesc|General|db|A database authority. Typical databases in
 
bioinformatics are FlyBase, GO, UniProt, NCBI, MGI, etc. The authority
 
bioinformatics are FlyBase, GO, UniProt, NCBI, MGI, etc. The authority
 
is generally known by this shortened form, which is unique within the
 
is generally known by this shortened form, which is unique within the
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decided.}}
 
decided.}}
 
{{ChadoColumnsHeader|General|db}}
 
{{ChadoColumnsHeader|General|db}}
{{ChadoColumnDesc||db_id|serial|''PRIMARY KEY''
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{{ChadoColumnDesc||db_id|serial|''PRIMARY KEY''<br />
 
+
 
}}
 
}}
{{ChadoColumnDesc||name|character varying(255)|''UNIQUE''
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{{ChadoColumnDesc||name|character varying(255)|''UNIQUE''<br />
 
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''NOT NULL''<br />
''NOT NULL''
+
 
+
 
}}
 
}}
 
{{ChadoColumnDesc||description|character varying(255)|}}
 
{{ChadoColumnDesc||description|character varying(255)|}}
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{{ChadoTablesReferencingHeader|db}}
 
{{ChadoTablesReferencingHeader|db}}
 
+
{{ChadoReferencingTable|General|dbxref}}
* None.
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</protect>
 
</protect>

Latest revision as of 19:58, 24 November 2010

This template is a Chado Table Template. It defines a single table from the Chado schema, and every Chado table has a template like this one. This template is automatically included in two places:

  1. The module page for the module the table is a part of. This is where updates and comments should be posted.
  2. The Chado Tables page, which lists all tables.

You can include this template anywhere you want to show the table description.


Table: db
Module: General

A database authority. Typical databases in bioinformatics are FlyBase, GO, UniProt, NCBI, MGI, etc. The authority is generally known by this shortened form, which is unique within the bioinformatics and biomedical realm. To Do - add support for URIs, URNs (e.g. LSIDs). We can do this by treating the URL as a URI - however, some applications may expect this to be resolvable - to be decided.

db columns
FK Name Type Description
db_id serial PRIMARY KEY
name character varying(255) UNIQUE

NOT NULL

description character varying(255)
urlprefix character varying(255)
url character varying(255)

Tables referencing db via foreign key constraints: