Difference between revisions of "Talk:GBrowse NGS Tutorial"

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(New page: =SamTools compilation= I had to change the Makefile for samtools to have -fPIC compile-time options so that I could then compile Bio-SamTools which was complaining libbam.a(bgzf.o): rel...)
 
 
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=SamTools compilation=
 
=SamTools compilation=
I had to change the Makefile for samtools to have -fPIC compile-time options so that I could then compile Bio-SamTools which was complaining  
+
(CENTOS 5.4) I had to change the Makefile for samtools to have -fPIC compile-time options so that I could then compile Bio-SamTools which was complaining
 
   libbam.a(bgzf.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
 
   libbam.a(bgzf.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
  
 
-[[User:Stajich|Stajich]] 19:03, 14 November 2009 (UTC)
 
-[[User:Stajich|Stajich]] 19:03, 14 November 2009 (UTC)

Latest revision as of 19:04, 14 November 2009

SamTools compilation

(CENTOS 5.4) I had to change the Makefile for samtools to have -fPIC compile-time options so that I could then compile Bio-SamTools which was complaining

 libbam.a(bgzf.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC

-Stajich 19:03, 14 November 2009 (UTC)