User contributions
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- 11:17, 9 July 2010 (diff | hist) . . (+10,757) . . N GBrowse 2.0 Install HOWTO (New page: This article describes '''how to install GBrowse 2.0'''. ''For the main GBrowse 2.0 HOWTO article, see: GBrowse 2.0 HOWTO.'' == GBrowse Installation == This section describes how to ...)
- 11:15, 9 July 2010 (diff | hist) . . (-10,413) . . GBrowse 2.0 HOWTO (→GBrowse Installation)
- 11:10, 9 July 2010 (diff | hist) . . (+69) . . GBrowse Configuration/Glyphs
- 10:48, 9 July 2010 (diff | hist) . . (+8,593) . . N GBrowse Configuration/URL schema (New page: This article describes '''the public CGI parameters recognized by GBrowse'''. ''For the main GBrowse configuration article, see: GBrowse Configuration.'' = Invoking GBrowse URLs = B...)
- 10:47, 9 July 2010 (diff | hist) . . (-8,387) . . GBrowse 1 Configuration HOWTO (→Invoking GBrowse URLs (under construction): splitting out defined sections of text into sub-pages. This should help re-organize content headings into more logical groupings, e.g. new index pages.)
- 10:45, 9 July 2010 (diff | hist) . . (0) . . m GBrowse 1 Configuration HOWTO (→THE Bio::MOBY Browse)
- 10:45, 9 July 2010 (diff | hist) . . (+9,557) . . N GBrowse Configuration/BioMOBY (New page: This article describes '''BioMOBY and Bio::MOBY Browse''' and how to configure it for use in GBrowse. ''For the main GBrowse configuration article, see: GBrowse Configuration.'' = Th...) (current)
- 10:43, 9 July 2010 (diff | hist) . . (-9,307) . . GBrowse 1 Configuration HOWTO (→THE Bio::MOBY Browse: Stripping out the largest sections of this mega-document into reasonable sub-pages. This improves site usability as well as quality?)
- 10:42, 9 July 2010 (diff | hist) . . (+6,488) . . N GBrowse Configuration/Balloons (New page: This article describes '''popup baloons''' and how to configure them in GBrowse. ''For the main GBrowse configuration article, see: GBrowse Configuration.'' ==Configuring Balloon Too...)
- 10:41, 9 July 2010 (diff | hist) . . (-6,184) . . GBrowse 1 Configuration HOWTO (→Configuring Balloon Tooltips: I really think this is teh way to go ... stripping out sections to put them in sub-pages)
- 10:39, 9 July 2010 (diff | hist) . . (+4,469) . . N GBrowse Configuration/Authentication (Already starting to doubt this idea)
- 10:37, 9 July 2010 (diff | hist) . . (-4,139) . . GBrowse 1 Configuration HOWTO (→Authentication & Authorization: continuing)
- 10:34, 9 July 2010 (diff | hist) . . (+4,647) . . N GBrowse Configuration/Feature frequency histograms (All other references to this topic in all other documents should point to this canonical source. This helps experts to improve the topics that they specalize in) (current)
- 10:32, 9 July 2010 (diff | hist) . . (+42) . . N Glyphs (Redirecting to GBrowse Configuration/Glyphs) (current)
- 10:31, 9 July 2010 (diff | hist) . . (-4,126) . . GBrowse 1 Configuration HOWTO (→Generating Feature Frequency histograms: I've started, so I may as well continue in a half assed way)
- 10:29, 9 July 2010 (diff | hist) . . (+44) . . Glyphs and Glyph Options (please kill me)
- 10:24, 9 July 2010 (diff | hist) . . (+41) . . N GBrowse Configuration (When is a HOWTO not a HOWTO?)
- 10:24, 9 July 2010 (diff | hist) . . (+5,945) . . N GBrowse Configuration/Glyphs (YES!)
- 10:21, 9 July 2010 (diff | hist) . . (-5,596) . . GBrowse 1 Configuration HOWTO (→Glyphs and Glyph Options: navigating this document is driving me slightly insane. I decided to be bold, and break it up like webpages are supposed to.)
- 08:48, 9 July 2010 (diff | hist) . . (+80) . . GBrowse 1 Configuration HOWTO (→Configuration File layout: ;-))
- 08:48, 9 July 2010 (diff | hist) . . (-180) . . GBrowse 1 Configuration HOWTO (→The [GENERAL] Section: Less is more! And this has already been said)
- 08:43, 9 July 2010 (diff | hist) . . (-20) . . m GBrowse 1 Configuration HOWTO (→Adding and Configuring Databases: typo)
- 08:42, 9 July 2010 (diff | hist) . . (+84) . . Template:SF SVN (Debugged and added a description)
- 09:59, 8 July 2010 (diff | hist) . . (-2) . . m GBrowse Plugins (mybad)
- 09:59, 8 July 2010 (diff | hist) . . (+49) . . GBrowse Plugins (meh)
- 09:57, 8 July 2010 (diff | hist) . . (+45) . . GBrowse Plugins (meh)
- 09:54, 8 July 2010 (diff | hist) . . (+21) . . PrimerDesigner.pm
- 09:52, 8 July 2010 (diff | hist) . . (+22) . . GBrowse (→Description: +linky)
- 09:50, 8 July 2010 (diff | hist) . . (+20) . . GBrowse (→Description)
- 09:15, 8 July 2010 (diff | hist) . . (+522) . . GBrowse 2.0 HOWTO (→Selecting Installation Directories: exemplifying)
- 14:34, 16 June 2010 (diff | hist) . . (0) . . File:Jan2009ArtemisChadoGeneDB.pdf (Categories are missing from teh 'preview' feature) (current)
- 14:33, 16 June 2010 (diff | hist) . . (+34) . . File:Jan2009ArtemisChadoGeneDB.pdf
- 16:00, 26 November 2009 (diff | hist) . . (+10) . . N SequenceDumper.pm (New page: wuts this?)
- 12:55, 27 August 2009 (diff | hist) . . (-2) . . m Chado Best Practices (→Similiarities to Alignments: typoooooooooooo)
- 12:48, 27 August 2009 (diff | hist) . . (-41) . . Chado Best Practices (No point listing a section if its empty)
- 12:45, 27 August 2009 (diff | hist) . . (+63) . . Chado Best Practices (I wanted to make it clear from the TOC which sections "NeedsEditing")
- 08:10, 26 August 2009 (diff | hist) . . (+100) . . GBrowse Install HOWTO (→Bio::Graphics: Not sure if Bio::DB::Das::Chado has suffered the same fate)
- 08:07, 26 August 2009 (diff | hist) . . (-4) . . m GBrowse Install HOWTO (→BioPerl)
- 14:04, 20 July 2009 (diff | hist) . . (+108) . . August 2009 GMOD Meeting (→Agenda Suggestions)
- 14:09, 22 May 2009 (diff | hist) . . (+11) . . GBrowse 1 Configuration HOWTO (→Generating Feature Frequency histograms: plz?)
- 13:41, 22 May 2009 (diff | hist) . . (+392) . . Talk:GBrowse 1 Configuration HOWTO (→Renaming proposal?: new section)
- 04:42, 22 May 2009 (diff | hist) . . (+280) . . Store an unigene in Chado HOWTO (→Unigene) (current)
- 15:53, 21 May 2009 (diff | hist) . . (0) . . m Region panel (Regionview panel moved to Region panel: Is this the same as the details panel?) (current)
- 15:53, 21 May 2009 (diff | hist) . . (+26) . . N Regionview panel (Regionview panel moved to Region panel: Is this the same as the details panel?) (current)
- 15:46, 21 May 2009 (diff | hist) . . (+181) . . N Region panel (New page: Where should this page redirect? I think there should be a series of pages describing the various components of GBrowse. See also: the overview panel. Category:GBrowse)
- 15:45, 21 May 2009 (diff | hist) . . (+37) . . Overview panel (current)
- 15:41, 21 May 2009 (diff | hist) . . (+146) . . N Overview panel (New page: Where should this page redirect? I think there should be a series of pages describing the various components of GBrowse. Category:GBrowse)
- 08:47, 19 May 2009 (diff | hist) . . (-3) . . m Chado FAQ (→What is this FAQ?)
- 08:46, 19 May 2009 (diff | hist) . . (-39) . . m Chado FAQ (removing my accidental + cat)
- 08:46, 19 May 2009 (diff | hist) . . (+5) . . Mailing list (Caps Are Wrong IMHO) (current)
- 08:44, 19 May 2009 (diff | hist) . . (+27) . . N Mailing list (Redirecting to Mailing lists)
- 08:44, 19 May 2009 (diff | hist) . . (+104) . . Chado FAQ (→What is this FAQ?)
- 08:16, 19 May 2009 (diff | hist) . . (+9) . . Talk:Introduction to Chado (current)
- 08:16, 19 May 2009 (diff | hist) . . (+38) . . Talk:Introduction to Chado
- 08:08, 19 May 2009 (diff | hist) . . (+152) . . N Talk:Introduction to Chado (New page: What is a 'CDS exon' (used in some of the feature graphs on this page). I don't find this in SO. --~~~~)
- 13:55, 13 May 2009 (diff | hist) . . (+30) . . N Adapter (If you say so) (current)
- 15:19, 19 January 2009 (diff | hist) . . (-4) . . GBrowse 1 Configuration HOWTO (→Adding and Configuring Databases: matches the convention used in the install HOWTO)
- 10:05, 19 January 2009 (diff | hist) . . (+2) . . GBrowse Install HOWTO (→Try the Browser Out: TCF3 - no such feature)
- 09:56, 19 January 2009 (diff | hist) . . (+24) . . GBrowse Install HOWTO (→Try the Browser Out: Updated (and improved the syntax of) some paths)
- 09:40, 19 January 2009 (diff | hist) . . (+3) . . m GBrowse Install HOWTO (→Try the Browser Out)
- 13:35, 16 January 2009 (diff | hist) . . (+53) . . Talk:GBrowse Install HOWTO (→GBrowse Quick Install) (current)
- 13:34, 16 January 2009 (diff | hist) . . (+543) . . Talk:GBrowse Install HOWTO (→GBrowse Quick Install: new section)
- 12:16, 16 January 2009 (diff | hist) . . (+116) . . GBrowse Install HOWTO (→Details: I'm actually beginning to understand how it all hangs together!)
- 10:36, 16 January 2009 (diff | hist) . . (+1,862) . . GBrowse Install HOWTO (→Installation Details: made gooder (I hope))
- 09:42, 16 January 2009 (diff | hist) . . (-19) . . GBrowse Install HOWTO (→BioPerl)
- 15:16, 15 January 2009 (diff | hist) . . (-1,243) . . Talk:GBrowse Install HOWTO
- 15:11, 15 January 2009 (diff | hist) . . (-83) . . Talk:GBrowse Install HOWTO
- 09:39, 15 January 2009 (diff | hist) . . (+425) . . GBrowse Install HOWTO (→BioPerl: Ug... I know BioPerl is currently in flux, but I thought I'd make this note for the time being anyway)
- 08:40, 15 January 2009 (diff | hist) . . (+7) . . GBrowse Install HOWTO (→BioPerl)
- 08:39, 15 January 2009 (diff | hist) . . (+71) . . GBrowse Install HOWTO (→BioPerl)
- 17:46, 14 January 2009 (diff | hist) . . (+10) . . GBrowse Install HOWTO (→BioPerl)
- 17:33, 14 January 2009 (diff | hist) . . (-24) . . GBrowse Install HOWTO (→BioPerl: somehow that 'dependency' is cyclical!)
- 16:54, 14 January 2009 (diff | hist) . . (+718) . . GBrowse Install HOWTO (→BioPerl)
- 15:43, 14 January 2009 (diff | hist) . . (-46) . . GBrowse Install HOWTO (→AUTHORS: Wiki pages don't need such explicit metadata)
- 15:36, 14 January 2009 (diff | hist) . . (+57) . . Talk:GBrowse Install HOWTO (→CPAN as non-root?)
- 15:35, 14 January 2009 (diff | hist) . . (+74) . . Talk:GBrowse Install HOWTO (→CPAN as non-root?)
- 15:35, 14 January 2009 (diff | hist) . . (+236) . . Talk:GBrowse Install HOWTO (→Question about Optional Perl modules: new section)
- 15:32, 14 January 2009 (diff | hist) . . (+4) . . GBrowse Install HOWTO (→Prerequisites)
- 15:30, 14 January 2009 (diff | hist) . . (+76) . . GBrowse Install HOWTO (→Prerequisites)
- 09:46, 18 December 2008 (diff | hist) . . (+452) . . N Talk:Overview (New page: The section '''GFF Databases''' -> has the phrase "GFF is described below, it's a compact format for describing sequence and sequence annotations", however, AFAICT, GFF is not described be...)
- 09:34, 18 December 2008 (diff | hist) . . (+331) . . N Template talk:CPAN (New page: I wanted to update the template with this slightly more generic version: <nowiki>{{#if: {{{1|}}} | [http://search.cpan.org/perldoc?{{{1}}} {{{1}}}] | [http://search.cpan.org/ Search CPAN...) (current)
- 16:12, 16 December 2008 (diff | hist) . . (-68) . . Downloads (Well I can't find it if it is!)
- 16:09, 16 December 2008 (diff | hist) . . (+42) . . User:DanBolser
- 17:49, 31 October 2008 (diff | hist) . . (+4) . . GBrowse Install HOWTO (→Creating your own Genome Database: AGH - I can't flippin find the right spelling!)
- 17:46, 31 October 2008 (diff | hist) . . (+73) . . GBrowse Install HOWTO (→Creating your own Genome Database: eh ???)
- 17:43, 31 October 2008 (diff | hist) . . (+99) . . GBrowse/Configure HOWTO (oh well...)
- 17:37, 31 October 2008 (diff | hist) . . (+268) . . N MediaWiki talk:Sidebar (New page: What happened to 'recent changes'? Why was this removed from the navigation box? Its quite useful really! Also can you add an entry in the 'documentation' box for...)
- 17:34, 31 October 2008 (diff | hist) . . (+1,307) . . Talk:GBrowse/Configure HOWTO (→Loading the GFF file into the database: new section) (current)
- 17:30, 31 October 2008 (diff | hist) . . (+6) . . GBrowse/Configure HOWTO (→A6. Loading the GFF file into the database: Fixed a TYPO)
- 16:54, 31 October 2008 (diff | hist) . . (+371) . . N Talk:GBrowse/Configure HOWTO (New page: == Generating this document == From the linux shell I stared up CPAN, then: install Pod::Simple::Wiki::Mediawiki That went smoothly, allowing me to run this... "perl/bin/pod2wiki -s m...)
- 16:52, 31 October 2008 (diff | hist) . . (-8) . . GBrowse/Configure HOWTO
- 16:51, 31 October 2008 (diff | hist) . . (+70) . . GBrowse/Configure HOWTO (here and here!)
- 16:50, 31 October 2008 (diff | hist) . . (+103) . . GBrowse/Configure HOWTO (one detail at a time...)
- 16:49, 31 October 2008 (diff | hist) . . (+199) . . GBrowse/Configure HOWTO (Need to fill in the details... Ahhh... so that's how I remove the categories! nice.)
- 16:29, 31 October 2008 (diff | hist) . . (0) . . GBrowse/Configure HOWTO (→A3. Identifying the reference sequence: Fixed a typo... I hope this document isn't somwhere else on the wiki already...)
- 14:22, 31 October 2008 (diff | hist) . . (-254) . . GBrowse/Configure HOWTO (erm... I accidentlaly typed into the category box the comment that I wanted to save the page with... how do I remove categories?)
- 14:21, 31 October 2008 (diff | hist) . . (-409) . . GBrowse/Configure HOWTO (→CONTENTS)
- 14:20, 31 October 2008 (diff | hist) . . (+121,449) . . N GBrowse/Configure HOWTO (New page: ===CONTENTS=== ; A. CREATING NEW DATABASES FROM SCRATCH; B. ADDING A NEW DATABASE TO THE BROWSER; C. GENERATING HISTOGRAMS; D. INTERNATIONALIZATION; E. AUTHENTICATION AND AUTHORIZATION; F....)
- 14:18, 31 October 2008 (diff | hist) . . (+66) . . GBrowse Install HOWTO (→Creating your own Genome Database: pod to wiki is easy)
- 11:37, 31 October 2008 (diff | hist) . . (+94) . . GBrowse Install HOWTO (→Creating your own Genome Database: linkified the POD ref)
- 16:11, 28 October 2008 (diff | hist) . . (+83) . . Talk:GBrowse Install HOWTO (→CPAN as non-root?: new section)
- 15:50, 28 October 2008 (diff | hist) . . (+108) . . Talk:GBrowse Install HOWTO
- 15:45, 28 October 2008 (diff | hist) . . (+466) . . Talk:GBrowse Install HOWTO
- 15:00, 28 October 2008 (diff | hist) . . (+1,555) . . Talk:GBrowse Install HOWTO
- 12:22, 28 October 2008 (diff | hist) . . (+2) . . N User:DanBolser (New page: Hi)
- 12:21, 28 October 2008 (diff | hist) . . (+804) . . Talk:GBrowse Install HOWTO
- 12:07, 28 October 2008 (diff | hist) . . (+71) . . N Talk:GBrowse Install HOWTO (New page: Aaaaaah.... --~~~~)
- 11:37, 28 October 2008 (diff | hist) . . (-1) . . m GBrowse Install HOWTO (→The NetInstaller)
- 11:36, 28 October 2008 (diff | hist) . . (+37) . . Template:NeedsEditing (Some minor cleanup - hope its consistent with the overall site style.) (current)
- 11:32, 28 October 2008 (diff | hist) . . (+112) . . GBrowse RPM HOWTO (current)
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