Difference between revisions of "PAG 2009"

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! [http://www.intl-pag.org/17/17-aqua.html Aquaculture Workshop]
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! 4:20-4:40
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| [http://www.intl-pag.org/17/abstracts/W04_Workshop_025.html A Review Of The Marine Genomics Project, A Web-Based Genomic And Transcriptional Database], Stephen P Ficklin, ''et al.''
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! rowspan="1" | Sunday<br />Jan 11
 
! rowspan="1" | Sunday<br />Jan 11

Revision as of 21:08, 19 December 2008

{{#icon: Paglogo.gif|PAG 2009 Conference||http://www.intl-pag.org/}}

GMOD will again have a strong presence at the Plant and Animal Genome Conference (PAG 2009). PAG is also immediately before the January 2009 GMOD Meeting and many GMOD members will likely attend both meetings.

There will be several workshops and computer demos, either about or using GMOD Components:

About GMOD Components

Day Track Time Title & Author Components
Sunday
Jan 11
Computer & Training Workshop 1:15-3:25 The Generic Genome Browser: A Hands on Workshop for Installing, Configuring and Using Your Own GBrowse, Scott Cain GBrowse
Monday
Jan 12
Odd Numbered Poster Session 10:00-11:30 P845: EcoliWiki And GONUTS: Wiki-Based Systems For Community Annotation, Daniel Renfro et al. Table Editor
Computer Demonstration 1:10-1:30 EcoliWiki and GONUTS: Wiki-Based Systems for Community Annotation, Jim Hu, et al. Table Editor
Even Numbered Poster Session 3:00-4:30 P824: Comparative Genomics Software Packages At GMOD, Scott Cain, David Clements, The GMOD Consortium Apollo, CMap, GBrowse_syn, Sybil, SynBrowse, Synview
P828: Managing Next Generation Sequence Data With GMOD, Dave Clements , Scott Cain, Paul Hohenlohe, William Cresko Chado, GBrowse
Wednesday
Jan 14
Computer & Training Workshop 10:20-12:30 Comparative Genomics with GBrowse_syn: A hands on workshop for visualizing your syntenic data with GBrowse_syn, Sheldon McKay, Scott Cain, and Dave Clements GBrowse_syn

Projects Using GMOD Components

Day Track Time Title & Author Components
Saturday
Jan 10
Aquaculture Workshop 4:20-4:40 A Review Of The Marine Genomics Project, A Web-Based Genomic And Transcriptional Database, Stephen P Ficklin, et al. Chado, GBrowse
Sunday
Jan 11
Computer Demonstration 4:50-5:10 The Rice Annotation Project Database (RAP-DB): Introduction to the Comparative Analysis between Rice and Other Plant Species, Hiroaki Sakai, et al. GBrowse
Monday
Jan 12
Odd Numbered Poster Session 10:00-11:30 P783: The Bovine Genome Database, Christopher P. Childers, et al. Apollo, chado, GBrowse
P785: The URGI Bioinformatics Platform: Focus On Genomic Annotation Databases And Tools, Michael Alaux, et al. Apollo, Chado, GBrowse
Computer Demonstration 1:30-1:50 CottonDB: A Resource for Cotton Genome Research, Jing Yu, et al. CMap
1:50-2:10 Updates to SoyGD: Genome Sequence Search Tools and a Predicted Interactome, David Lightfoot, et al. GBrowse
2:10-2:30 The Legume Information System (LIS): An Integrated, Dynamic Comparative Legume Information Resource, Gregory May et al. CMap
2:10-2:30 The MaizeGDB Genome Browser, Taner Sen et al. GBrowse
2:30-2:50 TreeGenes: A Forest Tree Genome Database, Jill Wegrzyn et al. CMap
Even Numbered Poster Session 3:00-4:30 P364: SoyBase And The Soybean Breeder’S Toolbox: Updated Features And New Data, David Grant, Rex T. Nelson, Steven B. Cannon, Randy C. Shoemaker CMap, GBrowse
Tuesday
Jan 13
Computer & Training Workshop 3:50-6:00 Using Gramene: A Genomics and Genetics Resource for Rice and other Grasses., Claire Hebbard, and Immanuel Yap CMap
Wednesday
Jan 14
Computer Demonstration 2:20-2:40 Structural and Functional Annotation of Wheat and Barley Genome Sequences with TriAnnot Pipeline, Philippe Leroy et al. Apollo (under consideration), GBrowse
2:40-3:00 GnpIS, The Plant Information System of INRA URGI Bioinformatic Platform, Delphine Steinbach et al. Apollo, Chado, CMap, GBrowse

Posters with GMOD Components

Title & Author Components
Integrated Genome Informatics - Current Approaches and Platforms in a Rapidly Changing Environment, Russell Smithies GBrowse