October 2004 GMOD Meeting

Generic Model Organism Database Construction Set

Meeting 5

October 4-5, 2004

Cold Spring Harbor Laboratory

Agenda

9:00am	Introductions Scott Cain, GMOD coordinator
9:15	Project updates (short!) CMAP Flybase tools (other than Apollo and chado) GBrowse http://brebiou.cshl.org/gmod/meetings/oct-2004/gmod-041004-kr.ppt Pathways tools http://brebiou.cshl.org/gmod/meetings/oct-2004/04_10_1_GMOD_presentation.ppt PubSearch/Fetch/Track Textpresso WormBase
10:45	Break
11:00	gmod, gmod-web and future directions Scott Cain
12:00	Lunch
1:00	Progress on Apollo and chado Mark Gibson, BDGP Guanming Wu, CSHL
2:30	Break
3:00	EST Clustering tools Feng Sun, Pratt Lab, University of Georgia http://brebiou.cshl.org/gmod/meetings/oct-2004/ESTminer.ppt Huang Yecheng, Gingle Lab, University of Georgia

October 5, Gerry Conference room, Marks Laboratory

9:30	http://brebiou.cshl.org/gmod/meetings/oct-2004/GenePattern_GMOD.ppt GenePattern for MicroArray analysis Ted Liefeld, Broad Institute
10:30	Break
11:00	http://brebiou.cshl.org/gmod/meetings/oct-2004/GMOD_SynBrowse1.ppt SynBrowse: A Synteny Browser for Comparative Sequence Analysis Xiaokang Pan, Iowa State University
12:00	Lunch
1:00	http://brebiou.cshl.org/gmod/meetings/oct-2004/gmod-oct04.ppt GMDOTools Don Gilbert, Indiana University
2:30	Discussion, wrap up, and what to do next Scott Cain