Difference between revisions of "MOD"
From GMOD
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|[http://projects.tcag.ca/variation/cgi-bin/gbrowse/hg17 Database of Genomic Variants] | |[http://projects.tcag.ca/variation/cgi-bin/gbrowse/hg17 Database of Genomic Variants] | ||
|- | |- | ||
| − | |[http://www.dictybase.org DictyBase] | + | |[http://www.dictybase.org DictyBase] (see [[:Category:DictyBase|also]]) |
|[http://insects.eugenes.org/DroSpeGe/ DroSpeGe] | |[http://insects.eugenes.org/DroSpeGe/ DroSpeGe] | ||
| − | |[http://ecocyc.org/ EcoCyc] | + | |[http://ecocyc.org/ EcoCyc] (see [[Pathway Tools|also]]) |
|- | |- | ||
| − | |[http://www.flybase.org FlyBase] | + | |[http://www.flybase.org FlyBase] (see [[:Category:FlyBase|also]]) |
|[http://fungal.genome.duke.edu/ Fungal Comparative Genomics] | |[http://fungal.genome.duke.edu/ Fungal Comparative Genomics] | ||
|[http://genome.kbrin.uky.edu/fungi_tel/browser.html Fungal Telomere Browser] | |[http://genome.kbrin.uky.edu/fungi_tel/browser.html Fungal Telomere Browser] | ||
| Line 60: | Line 60: | ||
|[http://magi.plantgenomics.iastate.edu/ MAGI] | |[http://magi.plantgenomics.iastate.edu/ MAGI] | ||
|[http://gmod.mbl.edu/ Marine Biological Lab Organism Databases] | |[http://gmod.mbl.edu/ Marine Biological Lab Organism Databases] | ||
| − | |[http://www.informatics.jax.org/ MGI] | + | |[http://www.informatics.jax.org/ MGI] (see [[:Category:MGI|also]]) |
|- | |- | ||
|[http://projects.tcag.ca/xenodup/gbrowse.php Non-Human Segmental Duplication Database] | |[http://projects.tcag.ca/xenodup/gbrowse.php Non-Human Segmental Duplication Database] | ||
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|[http://map.lab.nig.ac.jp/cgi-bin/gbrowse/Oryza_chr8/ Oryza Chromosome 8] | |[http://map.lab.nig.ac.jp/cgi-bin/gbrowse/Oryza_chr8/ Oryza Chromosome 8] | ||
| − | |[http://bioinformatics.ai.sri.com/ptools/ Pathway Tools] | + | |[http://bioinformatics.ai.sri.com/ptools/ Pathway Tools] (see [[Pathway Tools|also]]) |
| − | |[http://paramecium.cgm.cnrs-gif.fr/ ParameciumDB] | + | |[http://paramecium.cgm.cnrs-gif.fr/ ParameciumDB] (see [[ParameciumDB|also]]) |
|- | |- | ||
|[http://peanutgenetics.tamu.edu/cmap/ PeanutMap] | |[http://peanutgenetics.tamu.edu/cmap/ PeanutMap] | ||
| Line 78: | Line 78: | ||
|[http://puma.princeton.edu/ PUMAdb] | |[http://puma.princeton.edu/ PUMAdb] | ||
|- | |- | ||
| − | |[http://rgd.mcw.edu RGD] | + | |[http://rgd.mcw.edu RGD] (see [[:Category:RGD|also]]) |
| − | |[http://www.yeastgenome.org SGD] | + | |[http://www.yeastgenome.org SGD] (see [[:Category:SGD|also]]) |
|[http://sgdlite.princeton.edu/ SGD Lite] | |[http://sgdlite.princeton.edu/ SGD Lite] | ||
|- | |- | ||
|[http://planaria.neuro.utah.edu/tools/tools.php SmedDB] | |[http://planaria.neuro.utah.edu/tools/tools.php SmedDB] | ||
| − | |[http://www.sgn.cornell.edu/ SOL Genomics Network] | + | |[http://www.sgn.cornell.edu/ SOL Genomics Network] (see [[:Category:SGN|also]]) |
|[http://soybase.agron.iastate.edu/ Soybase] | |[http://soybase.agron.iastate.edu/ Soybase] | ||
|- | |- | ||
|[http://soybeangenome.siu.edu/ Soybean Gbrowse Database] | |[http://soybeangenome.siu.edu/ Soybean Gbrowse Database] | ||
|[http://t1dbase.org/cgi-bin/dispatcher.cgi/Welcome/display T1DBase] | |[http://t1dbase.org/cgi-bin/dispatcher.cgi/Welcome/display T1DBase] | ||
| − | |[http://www.arabidopsis.org TAIR] | + | |[http://www.arabidopsis.org TAIR] (see [[:Category:TAIR|also]]) |
|- | |- | ||
|[http://www.ciliate.org/help/Locus.shtml TGD] | |[http://www.ciliate.org/help/Locus.shtml TGD] | ||
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|[http://www.vectorbase.org VectorBase] | |[http://www.vectorbase.org VectorBase] | ||
|[http://wfleabase.org/ wFleaBase] | |[http://wfleabase.org/ wFleaBase] | ||
| − | |[http://www.wormbase.org WormBase] | + | |[http://www.wormbase.org WormBase] (see [[:Category:WormBase|also]]) |
|- | |- | ||
|[http://www.xanthusbase.org/ XanthusBase] | |[http://www.xanthusbase.org/ XanthusBase] | ||
Revision as of 17:06, 14 March 2008
Model Organism Databases are repositories for information on those organisms with a wealth of biological data that make them attractive to study as models of other species – including humans – that are more difficult to study directly [1]. Historically, these model organism databases include the handful of species with extensive genomic research data, such as the NIH model organisms.
The acronym has been extended to include Many organism and My organism databases, so that the MOD in GMOD applies to almost all organism/genome database projects.
GMOD Participating databases
The following databases/organizations are contributing to and/or adopting GMOD components, as of early 2007. See GMOD Users for a more detailed list.
