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Facts about "GBrowse syn"RDF feed
Available on platformweb +
Date published2010 +
Has DOI10.1002/0471250953.bi0912s31 +
Has PMCIDPMC3162311 +
Has PMID20836076 +
Has URLhttps://github.com/GMOD/GBrowse +, http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri%3Bname=chrX:620000..670000 +, http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501 +, http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele%3Bname=X:1050001..1150000 + and http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ +
Has authorMcKay SJ +, Vergara IA + and Stajich JE +
Has descriptionGBrowse_syn, or the Generic Synteny BrowseGBrowse_syn, or the Generic Synteny Browser, is a GBrowse-based synteny browser designed to display multiple genomes, with a central reference species compared to two or more additional species. It can be used to view multiple sequence alignment data, synteny or co-linearity data from other sources against genome annotations provided by GBrowse. GBrowse_syn is included with the standard GBrowse package (version 1.69 and later). GBrowse package (version 1.69 and later). +
Has development statusactive +
Has download URLhttps://github.com/GMOD/GBrowse +
Has full nameGeneric Synteny Browser +
Has logoGBrowse_syn_logo.png +
Has publication detailsCurrent protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] Chapter 9: Unit 9.12 +
Has software maturity statusbeta release +
Has support statusactive +
Has titleThe Arabidopsis Information Resource +, WormBase +, Sol Genomics + and Using the Generic Synteny Browser (GBrowse_syn). +
Has topicGBrowse syn +
Is open sourceYes +
Link typedownload +, source code +, demo server + and wild URL +
Published inCurrent protocols in bioinformatics / editoral board, Andreas D. Baxevanis ... [et al.] +
Release date1 January 2007 +
Tool functionality or classificationComparative genome visualization +
Written in languagePerl +
Has subobjectThis property is a special property in this wiki.GBrowse syn#https://github.com/GMOD/GBrowse +, GBrowse syn#http://mckay.cshl.edu/cgi-bin/gbrowse_syn/mercator/?search_src=Cbri;name=chrX:620000..670000 +, GBrowse syn#http://www.arabidopsis.org/cgi-bin/gbrowse_syn/arabidopsis/?name=Chr1%3A8367000..8370501 +, GBrowse syn#http://dev.wormbase.org/db/seq/gbrowse_syn/compara?search_src=Cele;name=X:1050001..1150000 + and GBrowse syn#http://solgenomics.net/gbrowse2/bin/gbrowse_syn/sol3/ +