GBrowse NGS Tutorial
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| {{#icon: BA2009Logo.png|Bioinformatics Australia | BA2009}} | GBrowse NGS Session Bioinformatics Australia 2009 (BA2009) |
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This tutorial walks you through how to configure the GBrowse genome browser to display Next Generation Sequencing (NGS) data using the SAMtools] GBrowse adaptor, Bio::DB::Sam. This tutorial was originally taught by Dave Clements at Bioinformatics Australia 2009 (BA2009) as part of a half day pre-conference workshop on GMOD.
VMware
| This tutorial was taught using a VMware system image as a starting point. If you want to start with that same system, download and install the Starting image.
See VMware for what software you need to use a VMware system image, and for directions on how to get the image setup and running on your machine. |
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Caveats
Important Note
This tutorial describes the world as it existed on the day the tutorial was given. Please be aware that things like CPAN modules, Java libraries, and Linux packages change over time, and that the instructions in the tutorial will slowly drift over time. Newer versions of tutorials will be posted as they become available.
