Difference between revisions of "Chado Natural Diversity Module/natdiv schema changes call"
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* Add nd_experiment_phenotypeprop. I use this to store phenotype observations specific to an nd_experiment. | * Add nd_experiment_phenotypeprop. I use this to store phenotype observations specific to an nd_experiment. | ||
* Add cvalue_id to NatDiv property tables and related property tables like projectprop. This allows for postcomposition of cvterms like units to the property type_id. | * Add cvalue_id to NatDiv property tables and related property tables like projectprop. This allows for postcomposition of cvterms like units to the property type_id. | ||
+ | ** Chado has some way to [http://gmod.org/wiki/Chado_CV_Module#Post-coordinating_Terms post-compose cvterms] which [[User:Maccallr|Maccallr]] 11:56, 17 May 2011 (UTC) doesn't understand. |
Revision as of 11:56, 17 May 2011
call to resolve the latest proposed changes to natdiv module, date TBC
Contents
participants
agenda
proposed changes
prop table in genotype module
- change: addition of (vanilla) prop table to genotype module [cvterm_id, value, rank]
- proposer: Seth Redmond / Vectorbase
- reason: enables us to store ontology terms for current genotypes, e.g. presence/absence of specific inversions - impossible under current schema
Hackathon changes
- phenotype
- phenotypeprop (Can somebody add the reason for adding this table?)
Yuri's proposals
- Add environmentprop. This is useful when creating phenstatements.
- Add phenstatementprop. This is useful when creating phenstatements.
- Add nd_experiment_protocolprop. I use this to store protocol values specific to an nd_experiment.
- Add nd_experiment_phenotypeprop. I use this to store phenotype observations specific to an nd_experiment.
- Add cvalue_id to NatDiv property tables and related property tables like projectprop. This allows for postcomposition of cvterms like units to the property type_id.
- Chado has some way to post-compose cvterms which Maccallr 11:56, 17 May 2011 (UTC) doesn't understand.