Chado Genetic Module
Introduction
Tables
phenstatement
Phenotypes are things like ”larval lethal”. Phenstatements are things like ”dpp[1] is recessive larval lethal”. So essentially phenstatement is a linking table expressing the relationship between genotype, environment, and phenotype.
Table 4.39: phenstatement
Column DatatypeDescription phenstatement id integer genotype idinteger environment idinteger phenotype id integer type id integer pub id integer
phendesc
a summary of a set of phenotypic statements for any one gcontext made in any one publication
Table 4.40: phendesc
ColumnDatatype Description phendesc id integer genotype id integer environment id integer description text pub idinteger
phenotype_comparison
comparison of phenotypes eg, genotype1/environment1/phenotype1 ”non-suppressible” wrt geno- type2/environment2/phenotype2
Table 4.41: phenotype comparison
ColumnDatatype Description phenotype comparison id integer genotype1 idinteger environment1 idinteger genotype2 idinteger environment2 idinteger phenotype1 id integer phenotype2 id integer type id integer pub idinteger
