Caryoscope

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2009 GMOD Community Survey

The 2009 GMOD survey focuses on genome and comparative genomics visualization. If you use any of GMOD's visualization components (such as Caryoscope), or if you have an interest in the topic, then you are strongly encouraged to take the survey before it closes on Friday, September 25. You may also win some GMOD gear.

Caryoscope

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Caryoscope

Caryoscope is a reusable Java UI component -- and a set of parsing utilities, command line tools and an application GUI -- for viewing gene expression data in a whole-genome context.

Caryoscope Homepage

It has been published in:

Awad IA, Rees CA, Hernandez-Boussard T, Ball CA, Sherlock G. (2004). Caryoscope: an Open Source Java application for viewing microarray data in a genomic context. BMC Bioinformatics 5:151.

Demo & Screenshots

Screenshots

Requirements

Dependencies page

Documentation

Documentation page

Contact

Gavin Sherlock, Stanford University.

Downloads

Download page