Difference between revisions of "Caryoscope"

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[[File:CaryoscopeLogo.jpg|center|link=http://caryoscope.stanford.edu|Caryoscope]]
 
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| {{#icon: CaryoscopeLogo.jpg|Caryoscope||http://caryoscope.stanford.edu}}
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| <span style="font-size: 300%">'''Caryoscope'''
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{{ComponentBox|{{ComponentBoxStatus|dev=Inactive}}||||}}
  
 
Caryoscope is a reusable Java UI component -- and a set of parsing utilities, command line tools and an application GUI -- for viewing gene expression data in a whole-genome context.
 
Caryoscope is a reusable Java UI component -- and a set of parsing utilities, command line tools and an application GUI -- for viewing gene expression data in a whole-genome context.
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[http://caryoscope.stanford.edu Caryoscope Homepage]
 
[http://caryoscope.stanford.edu Caryoscope Homepage]
  
It has been published in:
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==Status==
 
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[http://www.biomedcentral.com/1471-2105/5/151 Awad IA, Rees CA, Hernandez-Boussard T, Ball CA, Sherlock G.  (2004).  Caryoscope: an Open Source Java application for viewing microarray data in a genomic context.  ''BMC Bioinformatics'' '''5''':151.]
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Caryoscope is no longer in active development, but the developers provide user support.
  
 
==Demo & Screenshots==
 
==Demo & Screenshots==
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[http://caryoscope.stanford.edu/documentation.html Documentation page]
 
[http://caryoscope.stanford.edu/documentation.html Documentation page]
  
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==Publications==
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[http://www.biomedcentral.com/1471-2105/5/151 Awad IA, Rees CA, Hernandez-Boussard T, Ball CA, Sherlock G.  (2004).  Caryoscope: an Open Source Java application for viewing microarray data in a genomic context.  ''BMC Bioinformatics'' '''5''':151.]
  
 
==Contact==
 
==Contact==

Latest revision as of 17:33, 3 October 2012

Caryoscope
Status
  • Mature release
  • Inactive development
  • Active support

Caryoscope is a reusable Java UI component -- and a set of parsing utilities, command line tools and an application GUI -- for viewing gene expression data in a whole-genome context.

Caryoscope Homepage

Status

Caryoscope is no longer in active development, but the developers provide user support.

Demo & Screenshots

Screenshots


Requirements

Dependencies page


Documentation

Documentation page

Publications

Awad IA, Rees CA, Hernandez-Boussard T, Ball CA, Sherlock G. (2004). Caryoscope: an Open Source Java application for viewing microarray data in a genomic context. BMC Bioinformatics 5:151.

Contact

Gavin Sherlock, Stanford University.

Downloads

Download page