Difference between revisions of "BioMart"

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{{Tool data
<center>{{#icon: Biomart250.png|BioMart||http://www.biomart.org/}}</center>
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|name=BioMart
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|status=mature
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|dev=active
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|support=active
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|type=Community Annotation, Database schema, Database tools, Genome Annotation, Middleware, Tool Integration, Data federation software
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|platform=linux, unix, os x, windows, web
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|about=BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.
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|open source=Yes
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|licence=[http://opensource.org/licenses/LGPL-3.0 LGPL]
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|input=Any data that can be stored in the relational database
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|output=APIs: REST/SOAP, JAVA, SPARQL
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|release date=2001/01/01
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|logo=Biomart250.png
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|papers=http://www.biomart.org/publications.html
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|dl tracking=We do not track downloads but the usage can be also tracked through http://www.biomart.org/community.html
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|gmod date=
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|survey link=
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|contact email=arek.kasprzyk@gmail.com
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|dev status=
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}}
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All BioMart documentation has now been moved to the [http://www.biomart.org/ BioMart website].
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[[File:Biomart250.png|center|link=http://www.biomart.org/|BioMart]]
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[[Category:BioMart]]
 
[[Category:BioMart]]
 
[[Category:Database Tools]]
 
[[Category:Database Tools]]
 
[[Category:GMOD Components]]
 
[[Category:GMOD Components]]
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{{SemanticLink
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|linkurl=http://www.biomart.org/download.html
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|linktype=download
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}}
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{{SemanticLink
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|linkurl=http://www.biomart.org/
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|linktype=website
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}}
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{{SemanticLink
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|linkurl=http://www.biomart.org/community.html
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|linktitle=BioMart user community
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|linktype=wild URL
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|linkdesc=Links to BioMart installations in the wild
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}}
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{{InteroperableComponent
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|relationship=provides data for
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|object=GBrowse
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}}

Latest revision as of 22:26, 15 October 2013

All BioMart documentation has now been moved to the BioMart website.

BioMart
Facts about "BioMart"RDF feed
Available on platformlinux +, unix +, os x +, windows + and web +
Has URLhttp://www.biomart.org/download.html +, http://www.biomart.org/ + and http://www.biomart.org/community.html +
Has descriptionBioMart is a freely available, open sourceBioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.e incorporated into the BioMart framework. + and Links to BioMart installations in the wild +
Has development statusactive +
Has input formatAny data that can be stored in the relational database +
Has licenceLGPL +
Has logoBiomart250.png +
Has output formatAPIs: REST/SOAP +, JAVA + and SPARQL +
Has software maturity statusmature +
Has support statusactive +
Has titleBioMart user community +
Has topicBioMart +
Interaction typeprovides data for +
InteractorBioMart +
Interacts withGBrowse +
Is open sourceYes +
Link typedownload +, website + and wild URL +
Release date1 January 2001 +
Tool functionality or classificationCommunity Annotation +, Database schema +, Database tools +, Genome Annotation +, Middleware +, Tool Integration + and Data federation software +
Has subobjectThis property is a special property in this wiki.BioMart#http://www.biomart.org/download.html +, BioMart#http://www.biomart.org/ +, BioMart#http://www.biomart.org/community.html + and BioMart +