Difference between revisions of "BioMart"
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{{Tool data | {{Tool data | ||
|name=BioMart | |name=BioMart | ||
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|status=mature | |status=mature | ||
|dev=active | |dev=active | ||
|support=active | |support=active | ||
|type=Community Annotation, Database schema, Database tools, Genome Annotation, Middleware, Tool Integration, Data federation software | |type=Community Annotation, Database schema, Database tools, Genome Annotation, Middleware, Tool Integration, Data federation software | ||
− | |platform= | + | |platform=linux, unix, os x, windows, web |
|about=BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework. | |about=BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework. | ||
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|open source=Yes | |open source=Yes | ||
|licence=[http://opensource.org/licenses/LGPL-3.0 LGPL] | |licence=[http://opensource.org/licenses/LGPL-3.0 LGPL] | ||
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|input=Any data that can be stored in the relational database | |input=Any data that can be stored in the relational database | ||
|output=APIs: REST/SOAP, JAVA, SPARQL | |output=APIs: REST/SOAP, JAVA, SPARQL | ||
− | | | + | |release date=2001/01/01 |
|logo=Biomart250.png | |logo=Biomart250.png | ||
− | | | + | |papers=http://www.biomart.org/publications.html |
+ | |dl tracking=We do not track downloads but the usage can be also tracked through http://www.biomart.org/community.html | ||
+ | |gmod date= | ||
|survey link= | |survey link= | ||
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|contact email=arek.kasprzyk@gmail.com | |contact email=arek.kasprzyk@gmail.com | ||
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|dev status= | |dev status= | ||
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}} | }} | ||
+ | All BioMart documentation has now been moved to the [http://www.biomart.org/ BioMart website]. | ||
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+ | [[File:Biomart250.png|center|link=http://www.biomart.org/|BioMart]] | ||
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+ | [[Category:BioMart]] | ||
+ | [[Category:Database Tools]] | ||
+ | [[Category:GMOD Components]] | ||
{{SemanticLink | {{SemanticLink | ||
|linkurl=http://www.biomart.org/download.html | |linkurl=http://www.biomart.org/download.html | ||
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|linktype=wild urls | |linktype=wild urls | ||
}} | }} | ||
− | + | {{InteroperableComponent | |
− | + | |relationship=provides data for | |
− | + | |object=GBrowse | |
− | + | }} |
Revision as of 22:25, 15 October 2013
All BioMart documentation has now been moved to the BioMart website.
"wild urls" is not in the list of possible values (website, download, source code, public server, demo server, wild URL, documentation, publication, social media, other) for this property. "wild urls" is not in the list of possible values (website, download, source code, public server, demo server, wild URL, documentation, publication, social media, other) for this property.
Facts about "BioMart"RDF feed
Available on platform | linux +, unix +, os x +, windows + and web + |
Has URL | http://www.biomart.org/download.html +, http://www.biomart.org/ + and http://www.biomart.org/community.html + |
Has description | BioMart is a freely available, open source … BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.e incorporated into the BioMart framework. + |
Has development status | active + |
Has input format | Any data that can be stored in the relational database + |
Has licence | LGPL + |
Has logo | Biomart250.png + |
Has output format | APIs: REST/SOAP +, JAVA + and SPARQL + |
Has software maturity status | mature + |
Has support status | active + |
Has topic | BioMart + |
Interaction type | provides data for + |
Interactor | BioMart + |
Interacts with | GBrowse + |
Is open source | Yes + |
Link type | download + and website + |
Release date | 1 January 2001 + |
Tool functionality or classification | Community Annotation +, Database schema +, Database tools +, Genome Annotation +, Middleware +, Tool Integration + and Data federation software + |
Has subobjectThis property is a special property in this wiki. | BioMart#http://www.biomart.org/download.html +, BioMart#http://www.biomart.org/ +, BioMart#http://www.biomart.org/community.html + and BioMart + |