Difference between revisions of "BioMart"

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All BioMart documentation has now been moved to the [http://www.biomart.org/ BioMart website].
 
 
[[File:Biomart250.png|center|link=http://www.biomart.org/|BioMart]]
 
 
 
{{Tool data
 
{{Tool data
 
|name=BioMart
 
|name=BioMart
|full name=
 
 
|status=mature
 
|status=mature
 
|dev=active
 
|dev=active
 
|support=active
 
|support=active
 
|type=Community Annotation, Database schema, Database tools, Genome Annotation, Middleware, Tool Integration, Data federation software
 
|type=Community Annotation, Database schema, Database tools, Genome Annotation, Middleware, Tool Integration, Data federation software
|platform=web, linux, os x, unix, windows
+
|platform=linux, unix, os x, windows, web
 
|about=BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.
 
|about=BioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.
|gmod date=
 
|release date=2001
 
 
|open source=Yes
 
|open source=Yes
 
|licence=[http://opensource.org/licenses/LGPL-3.0 LGPL]
 
|licence=[http://opensource.org/licenses/LGPL-3.0 LGPL]
|language=
 
 
|input=Any data that can be stored in the relational database
 
|input=Any data that can be stored in the relational database
 
|output=APIs: REST/SOAP, JAVA, SPARQL
 
|output=APIs: REST/SOAP, JAVA, SPARQL
|audience=
+
|release date=2001/01/01
 
|logo=Biomart250.png
 
|logo=Biomart250.png
|screenshot=
+
|papers=http://www.biomart.org/publications.html
 +
|dl tracking=We do not track downloads but the usage can be also tracked through http://www.biomart.org/community.html
 +
|gmod date=
 
|survey link=
 
|survey link=
|mail=
 
 
|contact email=arek.kasprzyk@gmail.com
 
|contact email=arek.kasprzyk@gmail.com
|papers=http://www.biomart.org/publications.html
 
|presentations=
 
|tutorials=
 
|getting started preamble=
 
|req=
 
|install=
 
|config=
 
|doc=
 
|dev ppl=
 
 
|dev status=
 
|dev status=
|dl tracking=We do not track downloads but the usage can be also tracked through http://www.biomart.org/community.html
 
|logo info=
 
|see also=
 
|extra=
 
 
}}
 
}}
 +
All BioMart documentation has now been moved to the [http://www.biomart.org/ BioMart website].
 +
 +
[[File:Biomart250.png|center|link=http://www.biomart.org/|BioMart]]
 +
 +
 +
 +
 +
 +
 +
[[Category:BioMart]]
 +
[[Category:Database Tools]]
 +
[[Category:GMOD Components]]
 
{{SemanticLink
 
{{SemanticLink
 
|linkurl=http://www.biomart.org/download.html
 
|linkurl=http://www.biomart.org/download.html
Line 52: Line 44:
 
|linktype=wild urls
 
|linktype=wild urls
 
}}
 
}}
 
+
{{InteroperableComponent
[[Category:BioMart]]
+
|relationship=provides data for
[[Category:Database Tools]]
+
|object=GBrowse
[[Category:GMOD Components]]
+
}}

Revision as of 22:25, 15 October 2013

All BioMart documentation has now been moved to the BioMart website.

BioMart

"wild urls" is not in the list of possible values (website, download, source code, public server, demo server, wild URL, documentation, publication, social media, other) for this property. "wild urls" is not in the list of possible values (website, download, source code, public server, demo server, wild URL, documentation, publication, social media, other) for this property.

Facts about "BioMart"RDF feed
Available on platformlinux +, unix +, os x +, windows + and web +
Has URLhttp://www.biomart.org/download.html +, http://www.biomart.org/ + and http://www.biomart.org/community.html +
Has descriptionBioMart is a freely available, open sourceBioMart is a freely available, open source, federated database system that provides unified access to disparate, geographically distributed data sources. It is designed to be data agnostic and platform independent, such that existing databases can easily be incorporated into the BioMart framework.e incorporated into the BioMart framework. +
Has development statusactive +
Has input formatAny data that can be stored in the relational database +
Has licenceLGPL +
Has logoBiomart250.png +
Has output formatAPIs: REST/SOAP +, JAVA + and SPARQL +
Has software maturity statusmature +
Has support statusactive +
Has topicBioMart +
Interaction typeprovides data for +
InteractorBioMart +
Interacts withGBrowse +
Is open sourceYes +
Link typedownload + and website +
Release date1 January 2001 +
Tool functionality or classificationCommunity Annotation +, Database schema +, Database tools +, Genome Annotation +, Middleware +, Tool Integration + and Data federation software +
Has subobjectThis property is a special property in this wiki.BioMart#http://www.biomart.org/download.html +, BioMart#http://www.biomart.org/ +, BioMart#http://www.biomart.org/community.html + and BioMart +