Difference between revisions of "BioDIG/tool data"

Revision as of 17:45, 21 August 2013

{{ {{{template}}} | name = BioDIG | full_name = Biological Database of Images and Genomes | status = alpha | dev = active | support = active | type = Community Annotation, Database schema, Database (Chado) web front ends, Database tools, Genome Visualization & Editing, Tool Integration, Image annotation | platform = web | logo = | home = http://biodig.org | about = BioDIG is a collection of software tools to connect image and genomic data. While we are experiencing an explosion in both sequence and image data, we need to link these two types of data. Examples include: model organism mutations, cell morphology — e.g. pathology and cancer and any type of phenotype data that can be imaged, that can be associated with one or more genes. Anything from a blue whale to a virus, really. | screenshot = | public_server = | dl = | dl_url = http://github.com/idoerg/BioDIG | dl_src = | dl_src_url = http://github.com/idoerg/BioDIG | dl_dev = | dl_dev_url = | getting_started_preamble = | req = | install = | config = | doc = http://biodig.org | papers =

• Andrew T. Oberlin, Dominika A. Jurkovic, Mitchell F. Balish, Iddo Friedberg (2013) Biological Database of Images and Genomes: tools for community annotations linking image and genomic information [1] (Database, in press)

| presentations = | tutorials = | wild_urls = | mail = https://groups.google.com/forum/?fromgroups#!forum/biodig | logo_info = | dev_ppl = Friedberg Lab, Miami University, Oxford OH, USA | dev_status = | contact_email = Andrew Oberlin; [swaminr@miamioh.edu Rajeswari Swaminathan]; [idoerg@gmail.com Iddo Friedberg] | input = GFF3; common image formats | output = | see_also = | demo_server = http://mydig.biodig.org | survey_link = }}