Difference between revisions of "BLAST Graphic Viewer"

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The BLAST Graphic Viewer provides a graphical [[visualization]] of the regions contained within HSPs relative to the query sequence. This distribution includes sample databases and a BLAST Search web form. It is a component of GMOD. It also know as blastGraphic.
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== Demo & Screenshots ==
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{{ :BLAST Graphic Viewer/tool_data | template = Template:ToolDisplay }}
 
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[http://www.yeastgenome.org/cgi-bin/blast-sgd.pl Demo at Stanford]
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== Requirements ==
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* The Apache web server ([http://www.apache.org http://www.apache.org/])
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* Perl 5.005 or higher
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* Perl modules from CPAN: Bio::GMOD::Blast::Graph, Bio::Perl
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* BLAST or BLAT applications
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See the INSTALL file in the distribution for more details.
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==Downloads==
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[http://sourceforge.net/project/showfiles.php?group_id=27707 From SourceForge]
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==Contact==
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[mailto:shuai@genome.stanford.edu Shuai Weng].
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[[Category:BLAST]]
 
[[Category:BLAST]]
 
[[Category:GMOD Components]]
 
[[Category:GMOD Components]]
 
[[Category:SGD]]
 
[[Category:SGD]]

Revision as of 00:10, 18 December 2012



Status
  • Mature release
  • Development: inactive
  • Support: active
Resources


About BLAST Graphic Viewer

BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. BLAST Graphic Viewer is also known as blastGraphic.

Visit the BLAST Graphic Viewer website.


Downloads



Using BLAST Graphic Viewer

System Requirements

Installation

See the INSTALL file in the blastGraphic download for full details.





Contacts and Mailing Lists

For support, please contact the BLAST Graphic Viewer developer, Shuai Weng.




More on BLAST Graphic Viewer


Raw tool data at BLAST Graphic Viewer/tool data