Difference between revisions of "BLAST Graphic Viewer"

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(updated to list extracted Bio::GMOD::Blast::Graph as a dep)
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The BLAST Graphic Viewer provides a graphical [[visualization]] of the regions contained within HSPs relative to the query sequence. This distribution includes sample databases and a BLAST Search form. It is a component of GMOD. It also know as blastGraphic.
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The BLAST Graphic Viewer provides a graphical [[visualization]] of the regions contained within HSPs relative to the query sequence. This distribution includes sample databases and a BLAST Search web form. It is a component of GMOD. It also know as blastGraphic.
  
 
== Demo & Screenshots ==
 
== Demo & Screenshots ==

Revision as of 17:39, 14 April 2011

The BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. This distribution includes sample databases and a BLAST Search web form. It is a component of GMOD. It also know as blastGraphic.

Demo & Screenshots

Demo at Stanford

Requirements

  • The Apache web server (http://www.apache.org/)
  • Perl 5.005 or higher
  • Perl modules from CPAN: Bio::GMOD::Blast::Graph, Bio::Perl
  • BLAST or BLAT applications

See the INSTALL file in the distribution for more details.

Downloads

From SourceForge

Contact

Shuai Weng.