Difference between revisions of "BA2009"

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| {{#icon: Ba2009.png|Bioinformatics Australia 2009|500|http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009}}
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| {{#icon: Ba2009.png|Bioinformatics Australia 2009|450|http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009}}
 
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There will be a half day, pre-conference GMOD workshop at [http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009 Bioinformatics Australia 2009 (BA2009)] in Melbourne.  The workshop will be held Wednesday 28 October 2009, from 2-6pm.
 
There will be a half day, pre-conference GMOD workshop at [http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009 Bioinformatics Australia 2009 (BA2009)] in Melbourne.  The workshop will be held Wednesday 28 October 2009, from 2-6pm.
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The workshop will introduce the [[Main Page|GMOD project]] and many project [[GMOD Components|components]].  The workshop will be run by [[User:Clements|Dave Clements]] of the [[GMOD Help Desk]].
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== Tentative Agenda ==
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 +
This agenda is subject to change.
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{| class="wikitable"
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|-
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! 2:00
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! Introduction
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|-
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| colspan="2" |
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|-
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! 2:10
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! Software
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|-
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! 2:15
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| <center>'''Visualization'''<br />
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[[GBrowse]], [[JBrowse]], [[GBrowse_syn]], [[CMap]], other [[Comparative Genomics]] viewers</center>
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|-
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! 3:55
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! Break
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|-
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! 4:05
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| <center>'''Data Management'''<br />
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[[Chado]], [[BioMart]], [[InterMine]], [[GFF3]]</center>
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|-
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! 4:50
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| <center>'''Annotation'''<br />
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[[MAKER]], [[DIYA]], [[Apollo]], [[Textpresso]], Community Annotation, Pipelines and Workflows</center>
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|-
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| colspan="2" |
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|-
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! 5:35
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! GMOD Community
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|}

Revision as of 23:15, 8 September 2009

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Bioinformatics Australia 2009|450|http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009}}

Pre-Conference GMOD Workshop
2:00-6:00pm, 28 October 2009


There will be a half day, pre-conference GMOD workshop at Bioinformatics Australia 2009 (BA2009) in Melbourne. The workshop will be held Wednesday 28 October 2009, from 2-6pm.

The workshop will introduce the GMOD project and many project components. The workshop will be run by Dave Clements of the GMOD Help Desk.


Tentative Agenda

This agenda is subject to change.

2:00 Introduction
2:10 Software
2:15
Visualization
GBrowse, JBrowse, GBrowse_syn, CMap, other Comparative Genomics viewers
3:55 Break
4:05
Data Management
Chado, BioMart, InterMine, GFF3
4:50
Annotation
MAKER, DIYA, Apollo, Textpresso, Community Annotation, Pipelines and Workflows
5:35 GMOD Community