Difference between revisions of "Apollo"

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[[pr03mb4]] was here to winz
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The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at [http://www.ensembl.org Ensembl], and the other primarily used for genome annotation and maintained at the [http://berkeleybop.org/ Berkeley Bioinformatics and Ontologies Project]. The latter is part of the GMOD project.
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[http://apollo.berkeleybop.org Apollo Homepage]
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==Demo & Screenshots==
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See [http://apollo.berkeleybop.org/current/images/mainwindow.jpg this screenshot].
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==Requirements==
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JDK 1.5 or higher.
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==Documentation==
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* [http://apollo.berkeleybop.org/current/userguide.html Apollo userguide]
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* [http://apollo.berkeleybop.org/current/javadoc/ Apollo Javadocs]
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* [http://sourceforge.net/tracker/?atid=462763&group_id=27707&func=browse Apollo bug tracker at Sourceforge]
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=== Presentations ===
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* [[Media:Apollo.ppt|Progress Report]] - from [[May 2005 GMOD Meeting]]
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* [[Media:Harris 040527.ppt|Future Plans]] - from [[April 2004 GMOD Meeting]]
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* [[Media:Apollo.GMOD.ppt|Progress Report]] - from [[September 2003 GMOD Meeting]]
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* [[Media:Apollo.GMOD.May2003.ppt|Progress Report]] - from [[May 2003 GMOD Meeting]]
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==Contact==
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* Ed Lee, [mailto:elee@lbl.gov elee@lbl.gov]
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* The [http://mail.fruitfly.org/mailman/listinfo/apollo Apollo mailing list]
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==Downloads==
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[http://sourceforge.net/project/showfiles.php?group_id=27707 From SourceForge.]
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==Users==
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Off the top of the heads of the attendees of the [[November 2007 GMOD Meeting]]. Sorted by version.
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* Triggers
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** VMWare
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** Dolan-Rice
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* Crabtree
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** Paramecium
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** INRA
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** UCSF (Smith)
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* cXML
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** FlyBase
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** BovineBase
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** VectorBase
  
 
[[Category:Annotation]]
 
[[Category:Annotation]]

Revision as of 17:35, 26 May 2008

The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at Ensembl, and the other primarily used for genome annotation and maintained at the Berkeley Bioinformatics and Ontologies Project. The latter is part of the GMOD project.

Apollo Homepage

Demo & Screenshots

See this screenshot.

Requirements

JDK 1.5 or higher.

Documentation

Presentations

Contact

Downloads

From SourceForge.

Users

Off the top of the heads of the attendees of the November 2007 GMOD Meeting. Sorted by version.

  • Triggers
    • VMWare
    • Dolan-Rice
  • Crabtree
    • Paramecium
    • INRA
    • UCSF (Smith)
  • cXML
    • FlyBase
    • BovineBase
    • VectorBase
Retrieved from "http://gmod.org/mediawiki/index.php?title=Apollo&oldid=5491"